Triticum dicoccoides (wild emmer wheat): 119289069
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Entry
119289069 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119289069
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119289069
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119289069
NCBI-ProteinID:
XP_037424395
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Position
4A:complement(536205561..536207190)
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AA seq
401 aa
AA seq
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MPARRRTSLALLAHLCVSLASAASYSVVDYGAVADGRTDCAGAFLRAWAAACGTEGEGPA
AVVVPAGEFLVSRARFSGPCRSGAVSVSIAGTVLAPVPYAGAQLWIVFQNVDGVSVIGGT
LDGRGQAYWACRRAGGGSSCPAATRSLTIYRSRNVVIQGLTSVNSAGIHVTVQASTGVAI
VDTVVSAPGDSPNTDGIHIKQSSDITIRNAVVGTGDDCISMVEGSSDVWIQGVTCGPGHG
ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGLVDGVAFSDVVMRNVRN
PIIVDQNYCPGNVSCPTEGSGIKITNVSYTDVEGTSATSVAVRFDCSPSQPCTGITMRNV
WLGYGERRRAAESFCRNAYGVAYGHVVPPSCLAHQEMFCYK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacgacggcgcaccagccttgctctcctcgcccacctgtgcgtgtcgctcgcc
tccgcggcgtcctacagcgtcgtcgactacggcgccgtggccgacggccggacagactgc
gcaggggcgttcctccgcgcgtgggccgcggcgtgcggcacggaaggcgagggcccggcc
gcggtggtcgtgccggcaggcgagttcttggtttccagggcgaggttcagcgggccgtgc
aggagcggcgcggtgagcgtgagcatcgcgggcacggtgctcgcgcccgtgccgtacgcc
ggcgcgcagctctggatcgtgttccagaacgtggacggggtgtccgtcatcggcggcacg
ctcgacggcaggggccaggcgtactgggcgtgccggagagccggcggcggctcctcttgc
cccgccgccaccaggtcgttgacgatctaccggtcgaggaacgtggtgatccaaggcctg
acgtcggtgaacagcgcgggcatacacgtcaccgtgcaggcgagcaccggcgtggcgata
gtggacacggtggtgtcggcgccgggggacagccccaacaccgacggcatccacatcaag
cagtcgagcgacatcaccatccggaacgctgtcgtcggtaccggcgacgactgcatctcc
atggtcgagggctcgtcggacgtctggattcagggcgtcacgtgcggccctgggcacggc
atcagtattgggagcctgggagacacgccggagcaggtggccgtgcggaacatcaccgtg
aaggccgtgacgctcgccgggacgaccaacgggctgcggatcaagtcgtgggccaaggcc
aacagcgggctcgtcgacggcgtcgccttctcggacgtggtcatgaggaacgtccgcaac
ccgattatcgtcgaccagaactactgccccggcaacgtcagctgccccaccgagggatcg
gggatcaagatcaccaacgtgtcatacacggacgtcgaggggacgtcggcgacgtcggtg
gcggtgcggttcgactgcagcccgagccagccgtgcaccggaatcaccatgcggaacgtt
tggctgggctacggggagcggcggcgagcggccgagtccttttgccggaacgcgtatggg
gttgcgtatgggcacgttgtcccgccgagttgcctggcccaccaggaaatgttttgctac
aagtga
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