Triticum dicoccoides (wild emmer wheat): 119289239
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Entry
119289239 CDS
T07278
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119289239
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdc01002
]
119289239
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119289239
03036 Chromosome and associated proteins [BR:
tdc03036
]
119289239
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119289239
Peptidases and inhibitors [BR:
tdc01002
]
Metallo peptidases
Family M67
119289239
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119289239
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
119289239
BRISC complex
119289239
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
119289239
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119289239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
119289239
NCBI-ProteinID:
XP_037424502
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All DBs
Position
1A:556405352..556411700
Genome browser
AA seq
427 aa
AA seq
DB search
MSLTEVRIGEEVWLTCLSHALTTETEEVMGLLLGDVVSSSKGGSTAVIWGASPQMRCERK
KDRVEVNPELLAAASAQAEVMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFQLLD
PGFVGLIFSCFSEDAQKVGKIQVIAFQSLDGTQNTQRAIVPVITNPVINLEPSWSSSDSS
LALIEGIEQDTGDSRASNGSKVWGRSQDMDLYPSLDTNHSARHLPIENAIVPFEPENSAG
PSIDQDGSDLSPSIQEALHRSTMDISGAEYKRKEVPLKVFPTRHLLKLDTTLSSYCDMQR
VLFEEEQSAYNQAMLQNICDGKMHPLTSMHHTSTYNASLCKLMEYCLSPAITVLQDRVKE
NELRLAMLVEEAKQLEAEQSTKTGSPRRAMPGGTTSGITSPRGQDKYPSGRQGGPISPSS
SGRRKAP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacggaggtcaggatcggcgaggaggtgtggctcacctgcctctcccacgcc
ctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgtgtcctccagc
aagggcggctccacggcggtgatatggggcgcgtcgccgcagatgaggtgcgagcggaag
aaggaccgcgtcgaggtcaaccccgagctgctcgccgccgcgtcggcgcaggccgaggta
atgacggccaccatcgggaagacgacccgggtgatcggctggtaccactcgcacccgcat
atcaccgtcctgccttcccatgtagatgtgcgtacccaggctatgtttcagttgctagat
ccaggctttgttgggctgatattttcctgttttagtgaagatgctcaaaaggttgggaaa
atccaagtgattgccttccagtcactcgatgggacacagaacacacagcgtgctattgtt
cctgttattaccaatcctgtcattaaccttgaaccatcttggagttcatccgatagctca
ttagcattgattgagggcattgaacaggacactggagattctagagcttcaaacggaagc
aaggtctggggaagatctcaggatatggatctgtatccttctttggacacaaatcattcg
gcaagacatctaccaatagaaaacgctattgttcctttcgaaccggaaaacagtgctggg
ccctctattgatcaagatggttcagatctgtccccaagcatacaggaggctttgcaccgg
tcaaccatggacataagtggtgcagagtataaaaggaaggaggtgccacttaaagtattc
cctacaaggcatctgctaaagctggacactacgttgagttcgtactgtgatatgcagcgt
gtcctttttgaagaggaacaatcagcatataaccaagccatgcttcagaatatttgtgat
gggaagatgcacccacttacatctatgcaccatacctccacatataatgcttctctatgc
aaactgatggaatactgcttgagccctgctataactgtgcttcaggaccgtgtgaaagaa
aacgaacttcggttagctatgctagtggaggaggctaaacaactggaggccgagcagagc
acgaaaactggctctcctcgccgtgcgatgcccggagggactaccagtggcatcacttcg
ccaaggggccaggacaagtacccttccggcagacaagggggccctataagccctagcagc
agcggccggaggaaggctccttga
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