Triticum dicoccoides (wild emmer wheat): 119289626
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Entry
119289626 CDS
T07278
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03410
Base excision repair
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119289626
03410 Base excision repair
119289626
03420 Nucleotide excision repair
119289626
03430 Mismatch repair
119289626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119289626
03036 Chromosome and associated proteins [BR:
tdc03036
]
119289626
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119289626
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119289626
DNA Replication Termination Factors
ELG1-RFC complex
119289626
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119289626
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119289626
Check point factors
HRAD17(Rad24)-RFC complex
119289626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
Ig_Tie2_1
DUF815
SAPIS-gp6
Motif
Other DBs
NCBI-GeneID:
119289626
NCBI-ProteinID:
XP_037424834
LinkDB
All DBs
Position
1A:complement(360646923..360650768)
Genome browser
AA seq
591 aa
AA seq
DB search
MAIETPPPASPTAWPASPTGRTLSAAFADDRRREARRRAVHLLPGCGRPPQPRSNLVNRV
LHRFGAACVPKSTAATPTRTPPLPRRSSVSTPPRPRPSSASTPPTSTQVPARLDQADAER
VAARRPLREREDAAAVGREPTPPVSQASAVAATEVVASLASNWRSDTATTVGRGANIWVR
VSRKPKSPQVDSPQLSVESTAAAEDQYVWADRYRPSVLGEFICNKAVADELHRMVTERQC
NHFIFEGAQAVGKRSMVLALLRDAFGPDNLKIEEITKRIELKGEIAKHIDVKVKISDHHV
EVNLADLHGYEKYVITTLLNESIPPPDLICDHANCKVIVVHDADRLSSDLQHYVGWFLGR
YAGCNKIIFSCSSSSNLDAVEHLCKVVRLKPPSFDEIIKVLEFIATQEGIDLPRGLASRI
AASASNNLRQAIRSFEATWKANYPFTKDQPILTGWEEEIYDVAKKIMEEPSPKQLYLIRR
KIRKMIEHNVSPYFIFCHLVNELKRDRDEDFQNSIDELALELNQNEQCKEYKSQDTISDK
RAINIEGFAVEGPDQGEAIQCFIKIEEFTVRFMSFYRSLITKNSSRGGVPS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagaccccgccacccgcatccccgaccgcctggcccgcttccccgactggc
cgcaccctctccgcggccttcgccgacgaccgccgccgcgaggccaggcgccgcgccgtg
cacctcctcccgggctgcggcaggccgccgcagccgcgctccaatctcgtcaaccgcgtg
ctccaccgcttcggcgccgcctgcgtccctaagagcaccgccgccacccccacccggacg
cccccgctgcctcggcggtcgtcagtgtcgacgcccccgcggcctcggccgtcgtcggcg
tcgacgccgcccacgtcaacccaggtaccggcacgcctagaccaggcagacgcggagaga
gtcgctgccaggaggcctttgagggagagagaggacgccgccgccgtcggaagagagccg
acgccgccggtgtcccaagccagtgccgtggcggccaccgaagtggttgccagccttgcg
agcaactggagaagcgataccgccaccaccgtcgggagaggagcaaacatctgggtgagg
gtttcgcgcaagccgaagtcgccgcaggtggactctccgcagctgtcagtggaatcaaca
gcggcggcggaggatcagtacgtgtgggcggacaggtaccggcccagtgtgctcggggaa
ttcatatgcaacaaggccgtcgccgatgagctccaccggatggtgactgaacgccaatgc
aaccatttcatatttgaaggggcgcaggctgtcgggaagagaagcatggtgctggccctt
ttaagagatgcttttggtcctgataatctcaagatagaggaaatcacaaagagaatcgag
ctgaagggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtg
gaggtaaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaat
gagtcaatcccaccaccggacttgatttgcgatcatgctaactgcaaagtgattgtggtc
catgatgctgataggctttcgtctgatcttcagcattatgtcggttggtttttggggagg
tatgcaggttgcaacaaaattattttcagctgctccagttcttcaaaccttgatgccgtt
gaacatttatgcaaggttgtccgacttaaaccaccttcatttgatgagataatcaaggtt
ctagagttcattgctacacaagaaggcatagatttgcctcgtggacttgccagtagaatt
gcagctagcgcgagtaataatctccgacaggcaatacgctcttttgaagctacatggaaa
gcaaactatccattcacgaaagaccagcccattttgactggatgggaggaggaaatttat
gatgttgccaaaaaaatcatggaggagccaagtccaaagcagctgtatctcattcggcgg
aagatcagaaaaatgattgaacataatgtgtcaccttatttcattttctgtcacttggtt
aatgaactgaaaagggacagggatgaagattttcagaatagcatcgatgaactggcactg
gagttgaaccaaaacgagcagtgcaaagaatacaaatctcaggacacaatttctgacaaa
agagctatcaatatagaaggtttcgctgttgaaggcccggaccaaggggaagccatccaa
tgcttcataaagattgaagaattcactgtgaggttcatgagcttctacagatctttaata
acgaagaactcaagcagaggcggtgttccttcatga
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