Triticum dicoccoides (wild emmer wheat): 119290975
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Entry
119290975 CDS
T07278
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119290975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119290975
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119290975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
zf-P11
zf-RING_2
DUF1258
Motif
Other DBs
NCBI-GeneID:
119290975
NCBI-ProteinID:
XP_037425554
LinkDB
All DBs
Position
4B:477649038..477653870
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AA seq
647 aa
AA seq
DB search
MGGAADLVLKAACDACGKASELYSTACRHATLCNSCAATMARSRARCNVCAAPITNVIRV
PATALGFRFRDQCHYRCRRRRRRRRAWQFSALLSLTVLFVPTATQEYNVRVDTTAGKALS
IAKFNTGVPPFSKMKGAGNKWFLRKDGLTQGRQLTADMREKYYNRKPWILEDDTGEHQYQ
SQLEASQSATATYYLLIRRGKEFDAVPVGSWYNFSKIAQYKQLTLEEAEEKMNKRRSSAT
GYERWMMKTATHGAAAFGSDLKDLGDAKGKAADGVQSKKESSNEDGNHSDKGEEDEEEGI
AKKAVRGLSTRGVDDEEDGGKEDFDLEDEIEIGDDWEHEETFTDDDEALDIDPEERPDVA
DTENPTGPDIKQDDDENEQGAGGNLSKSGKELKKLLRRADGQNESDDEDDGDTDEDESPL
SVLAPKLEHQFGSEQQENNTAKLTATELAVSTPPAPRSNQKRKSGGDGAKTSNRAAVKKP
KAEPEAKTLGVKKEPPSSVEPISKASASAGSDTDTSAITEEEIIRVLRAIAPVRSQDFVP
RFKARIRTPEDKKHFHDIVMKYAYSHKTNGVSYLHLRKETTSAITEEEIVRVLGATAPVR
SHDFVLRFKDRIRTQEDKKHFHDIVMKFAYSHKTNGVSYLHLRKEYE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggggggcgccgccgacctggtgctgaaggcggcgtgcgacgcctgcggcaaggcgtcc
gagctctacagcaccgcctgccgccacgccaccctctgcaactcctgcgccgccaccatg
gcgcgctcgcgcgcgcgctgcaacgtctgcgccgcccccatcaccaacgtcatccgggta
cccgcgacggccctaggttttcgattccgcgatcaatgccattaccgctgccgccgccgc
cgccgccgccgccgcgcttggcagttttcggctctgttgtccctgaccgttttgtttgtt
ccaacggccacgcaggagtacaatgttcgggtggataccaccgcggggaaggccctttcc
atagccaaattcaacaccggcgtgccgcccttctccaagatgaagggtgcggggaacaag
tggtttcttcgtaaggatggcctgacgcaaggccggcagcttactgccgatatgcgggag
aagtactacaacagaaagccatggatattggaagatgatacaggtgaacatcagtaccaa
agtcaacttgaggcatcacaatctgcaactgctacatactatctgctgattaggcgtggc
aaggagttcgatgctgttcctgttggttcatggtataacttcagtaaaattgcacagtac
aaacaactgactttggaagaagctgaagagaagatgaataaaaggagaagcagtgcaact
gggtatgaacgatggatgatgaagacagctacacatggagccgccgcctttggttcggat
ctgaaggatcttggtgatgcaaagggcaaggcggcagatggggtccaatccaagaaagaa
agcagcaatgaggatgggaatcactctgataaaggcgaggaggacgaagaagagggaatt
gcaaagaaagctgtgcgtgggctttctacgaggggtgtggatgatgaagaggatggcgga
aaagaagactttgatttggaggatgagattgagataggtgatgattgggagcatgaagag
accttcactgatgatgatgaggctctggatattgacccagaggaaagacctgatgtagct
gatactgaaaaccctactggaccagatattaagcaggatgatgatgagaatgagcaagga
gctggtggtaacctgagcaagtccggtaaggaactaaaaaagctgctccgccgtgctgat
ggacaaaatgagtccgatgacgaagacgatggagacactgatgaagacgagtcaccattg
tcagtacttgctccaaaactggaacatcaattcggaagtgagcaacaggaaaataacact
gctaaactaacagcaacagaacttgctgttagcactccacctgcacccaggtccaatcaa
aaaaggaaatccggaggtgatggtgcaaaaacttcgaatcgtgcagcggtaaaaaagccg
aaggcagaacctgaggcaaaaacattaggtgtcaagaaggagccaccctcttccgtggaa
cctatttcaaaagcatctgcttcagcagggagtgacacagatacatctgcaattacagag
gaggaaatcataagagtacttcgtgcaattgctcctgtcagatcacaagattttgtaccc
aggtttaaggccagaataagaactccagaggacaagaaacattttcatgacattgtgatg
aaatatgcgtactcgcacaagaccaacggcgtcagctatcttcaccttcgaaaggagact
acatctgcaattacagaggaggaaatcgtaagagtacttggtgcaactgcccctgtcaga
tcacacgattttgtactcaggtttaaggatagaataagaactcaagaggacaagaaacat
tttcatgacattgtgatgaaatttgcgtactcgcacaagaccaacggcgtcagctatctt
caccttcgaaaggagtacgaatga
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