Triticum dicoccoides (wild emmer wheat): 119291212
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Entry
119291212 CDS
T07278
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119291212
03420 Nucleotide excision repair
119291212
03430 Mismatch repair
119291212
03440 Homologous recombination
119291212
03460 Fanconi anemia pathway
119291212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119291212
03032 DNA replication proteins [BR:
tdc03032
]
119291212
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119291212
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119291212
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119291212
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119291212
MMR (mismatch excision repair)
119291212
DSBR (double strand breaks repair)
HR (homologous recombination)
119291212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
119291212
NCBI-ProteinID:
XP_037425823
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All DBs
Position
4B:521780373..521783539
Genome browser
AA seq
592 aa
AA seq
DB search
MKCVPDGLFFLPRSFMASDGEAKVKAILSTHFASEVHSGKLQNLGLVRILNYTCNDIPQK
TDKMVIITKCEVVSQALDAEIKSEVKMEEPAALMKPKEEAAVLSKPIGVAPAAIMLKPRH
DVKSASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKVRVTNKGNLRSYRNAR
GEGHVFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQND
YEMTLNENAVVEEAEGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRR
KIDNESIPKRDIVVADDSNKTVTISLWNDLATTVGEELLDMVDSAPIIAVKSLKVSDFQG
VSVSTVGKSTLVINPELPETEKLRAWYESEGKGTTLASVGAGMGASNAGGLRSMYSDRVF
LSHITSDPNLGQDKPVFFSLYANISNIKPDQTMWYRACTTCNKKVTESLGSGYWCEGCQK
NYEQCSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDMFQLKLKE
ATWIPHLFRVSVVQNEYMGEKRQRITVRSESPVDYAAEARYQLEEISKLTSS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgttcctgacggactgttcttcttgcctcgcagtttcatggccagcgacggg
gaggcgaaggtcaaggcgatcctctccacccacttcgcgtcggaggtccactccggcaag
ctccagaacctgggcctcgtccgcatcctcaactacacatgcaacgacatcccacaaaag
acggacaagatggtgattatcaccaagtgcgaggtcgtgtcccaggcgcttgatgccgag
atcaagagcgaggtcaagatggaagagccagcggctctcatgaagcccaaggaggaggct
gcggtcctctccaagcccattggcgtggccccggctgcgattatgctgaagccgaggcac
gacgtgaagtccgcctcccagattgttagcgagcagcgcggaaatgctgctcctgctgct
cgcttggccatgacgagacgggtgcatcctctgatctccctcaacccctaccagggcaac
tgggtcatcaaggtgcgggtcacaaacaagggcaacctcaggtcatacaggaatgcccgt
ggagaaggccatgtctttaacgtagagctcactgacgaggatggcacccagatccaggcc
accatgttcaatgagcccgcaaagaagttctatcccgtgtttgagcttgggaaggtctac
tacatctccaaggggtcgctcagaattgcaaacaagcagttcaagacagtccagaatgac
tatgagatgaccctgaatgagaatgctgttgttgaagaagctgagggagaatctttcatt
ccgccagtgcaatacaactttgtcaagattgatatgctggggccatatgttggtggcagg
gagttagtagatatcattggtgttgttcagagtgtatcacctactctgagtatcagaaga
aagattgacaatgagtcaatccccaagcgtgacattgttgttgcagatgactcgaacaaa
actgtcaccatttctctttggaatgatcttgccaccactgttggtgaggaactcttggac
atggttgactctgcacctatcattgcagtgaagagcctgaaagtatctgactttcaaggt
gtgtctgtttctacagtaggcaaaagcacacttgtgattaacccagagttgcctgagact
gagaagcttagggcttggtatgaatctgaaggcaagggtactaccttggcatcagttggt
gctggaatgggtgcatccaacgctggtggcttgagatcaatgtactctgacagagttttt
ctgtctcacatcacaagtgaccctaatttgggccaggataagcctgttttcttcagcctg
tatgccaacataagcaacatcaagcctgaccagaccatgtggtaccgtgcctgcaccacc
tgcaacaagaaggtgactgagtcactcggatcaggatactggtgtgaagggtgccagaag
aactatgaacagtgctcattgaggtacatcatggtgatcaaggtctctgatcccactggt
gaggcctggctgtctcttttcaatgaccaagcagagaggatcgttggctgcagtgcagat
gagcttgatcggatcaggaaagaggagggcgatgacatgttccagctcaagctgaaggaa
gccacctggattccccacctgttccgcgtcagtgtcgtgcagaacgagtacatgggagag
aagaggcagaggatcaccgtgaggagtgagtcgccggtcgactatgccgctgaagcgagg
taccagctcgaggagatctccaagctcacctccagctag
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