Triticum dicoccoides (wild emmer wheat): 119291220
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Entry
119291220 CDS
T07278
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119291220
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119291220
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
119291220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
T2SSE
AAA_19
DEXQc_Suv3
PhoH
RAD51D_N
Motif
Other DBs
NCBI-GeneID:
119291220
NCBI-ProteinID:
XP_037425835
LinkDB
All DBs
Position
4B:523316504..523343259
Genome browser
AA seq
2078 aa
AA seq
DB search
MLAPLPRLTGSLRPHFDADQAYLLRKAALQARALPRPHDEWALARRFVPNWDDAPSDVRQ
AYKQFIGAVVELLNGEVVSEELQQVAQAVYRLFGTESDTTQKPLQRRNELERLVGYSVQD
SVLKKLAQLAQKLHSLQRGSIQEFVQEDTKVVDGDDTSEFGASFDFKAPSRFIIDVTLDD
DLPLGSGVSSSFQEEQHDASTTSCNSTAFAGPVDLRWLKDQCDLITISGGSMLSGDELAM
ALCRVLRSNKAGDEIAGELLDMVGDGAFEIVQDLLSHRKELGDAIQHGLTILKSEKLSSN
NQPKMPTYGTQVTIQTEYERQLDKIKRKEGRRAKRGAENGMNDFGADDFSSLLLASERKQ
PFDDMIGTGEGESSFQVTSLPQGTTRKHMKGYEEVKIPPTPTAPLGPNEKLIEIRELDDI
AQAAFQGYKSLNRVQSRIFQATYNTNENILVCAPTGAGKTNIAMIAVLHEVKQHFREGIL
HKNEFKIVYVAPMKALAAEVTATFGRRLSPLNLVVKELTGDMQLTRSEIEETQMIVTTPE
KWDVITRKSSDMALSMLVKLIIIDEVHLLNDDRGSVIETLVARTLRQVESMQSMIRIVGL
SATLPTYKEVAEFLRVNADTGLFYFDSSYRPVPLAQQYIGITERDYAKKNDLFNSICYDK
VVESIKQGHQALVFVHTRKDTGKTARTLIDLAAKAGEVELFSNADHPQYGLIKRDVSKAK
SREVIEFFDSGFGIHNAGMMRSDRNLMERLFADGLLKVLVCTATLAWGVNLPAHTVVIKG
TQLYDAKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTSQLPIE
SQFLGSLKDNLNAEVALGTVTNVREACAWLGYTYLFRRMKTNPLVYGITWEEVIGDPSMG
AKQRSFIIDAARSLDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYNEMLRRHMS
ESEVINMVAHSSEFENIVVREEEQDELETLARKACPLEVKGGPTDKHGKISILIQVFISR
ASVDSSSLHSDAQYISQSLGRIMRALFEICLRRGWSEMTSLLLEYCKAVDRKIWPHLHPL
RQFDRDISPEILWKLEERNVDLDRLYEMEENDVGALIRFSHQGRLVKQYVGYFPHVNLSA
SVSPITRTVLKVDLLITPEFVWKDRHHGMSQRWLIIVEDSENDTIYHSELFTLTKKMARG
TPTKMSFNIPIFEPHPPQYYIRAVSDSWLHSESIFTVSFHNLTLPQTQITHTELLDLKPL
PLSALGNKAYEDLYRFTHFNPIQTQAFHVLYHTETNVLLGAPTGSGKTISAELAMLHLFN
TQPDMKVVYIAPLKAIVRERMNDWRHRLVTQLGKKMVEMTGDFTPDMVALLSADIIISTP
EKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSIRFVG
LSTALANARDLADWLGVRDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAA
ICTHSPDKPVLIFVSSRRQTRLTALDLIQLAASDEKPTQFLSMADNSLDMILSQVTDSNL
RHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYY
DGKTKRYVDYVITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESNLR
EHLHDHINAEIVSSTIGNKEEAIIYLTWTYLYRRLVVNPSYYGLEDTETYTLNAYLSRLV
ETTLEDLEDSGCIKVDDHSVQSLILGKIASQYYLSYLTVSMFGSNIGPNTSLEAFVHILS
AAAEFDELPVRHNEDTLNRTLCEKVPYSVDQHHLDDPHVKANLLFQAHFSRAELPISDYI
TDLKSILDQSIRIIQAMIDVCANSGWLSSALTCMHLLQMIIQGLWFERDSSLLMLPSMND
NLLDHLKGRGVSTVLSLLDHSREELHKLLQPFSAADLYQDLQHFPRLDVKVKLQNEDKEQ
SKPQMLNIRMQIKNTRRSPRVFSSKFPKAKQEAWWLVLGNTTSSELYGLKRISFADRVLN
TRMELPPMLNIQEAKLIVVSDCYLGFDQEVSLGHLAKV
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgccgctccctcgcctgacgggctccctccgcccccacttcgacgccgaccag
gcctacctcctccgcaaggccgccctccaagcccgcgccctcccaaggccgcatgacgag
tgggcgctcgcccggaggttcgtgcccaactgggacgacgctcccagcgatgtgcgccag
gcgtacaagcagtttatcggcgccgtggtggagttgttgaacggggaggtggtgtctgag
gaactccagcaggttgctcaggctgtctataggttgtttggcacggagtccgacaccacc
cagaagcccctccagagaaggaatgaattggaacgacttgtgggctacagcgtgcaagac
tcagttctgaaaaagttagctcagttagctcagaagctccattcccttcaacgggggagc
attcaggaatttgtacaggaagacacgaaggtcgtagatggagatgatacaagtgaattt
ggggcaagctttgacttcaaagcaccttctcgtttcattattgatgttacgcttgatgat
gacctaccattgggaagtggtgtatcgagttcatttcaagaggagcagcatgatgccagc
actacatcttgtaattcaactgcttttgcgggtcctgtggatttgaggtggctaaaagat
cagtgtgatctgataactataagtggtggctcgatgctctcgggagatgaacttgcaatg
gctttgtgcagagtgctacgttccaataaagcaggcgacgagatagctggtgaactgctg
gacatggttggggatggtgcctttgaaatagttcaggatcttctttcacatagaaaagag
ctaggggatgcaattcagcatggattgacgatactgaaatcagaaaagttgtcttcaaat
aatcagccgaagatgccaacatatggcacacaagtaacaatacaaacagagtatgagcgt
cagcttgataagattaagaggaaagagggaaggcgtgccaaacgtggtgcagaaaatgga
atgaatgattttggtgctgacgatttctcatcccttcttctagcaagtgaaagaaagcag
ccatttgatgacatgattgggactggagaaggggagagtagtttccaagtaacttctctt
cctcaaggaacaacacggaaacatatgaaggggtatgaagaagtgaaaattccaccaact
cctacagcaccattgggacccaatgagaaactgattgaaataagagagttggatgatatc
gcccaagctgctttccagggatacaagtcactcaaccgtgttcagagccgtatttttcaa
gccacatacaacaccaatgagaacattctagtttgtgctccaacgggtgctggcaaaaca
aatattgcaatgattgcagttcttcatgaggttaaacagcacttcagggaaggcattttg
cataaaaacgagttcaagatagtgtatgttgcaccaatgaaggccttggctgcagaggta
acggcaacatttggtcgtcgattatctccattgaacctggttgttaaagaacttacaggc
gacatgcagttgaccagaagtgagattgaggaaacacagatgatagtgactactcctgag
aagtgggatgtcattacacgcaaaagcagcgatatggcattgtcaatgctggtcaagctg
ataatcattgatgaagtgcacctgctaaatgatgatagagggtcagtaattgagacacta
gttgctcgaactctacgccaggttgagtccatgcaatcaatgattcgcattgttggccta
tctgctacactgcctacttacaaagaggttgcagaatttttgcgggttaatgcagatact
ggccttttctactttgactcgagttaccgtccagttcctcttgctcaacagtacattgga
atcactgaaagggattacgccaagaaaaatgatctattcaatagtatttgctatgacaag
gttgtggagtccattaaacaaggtcatcaagcattggtttttgttcatacccgcaaggat
acagggaaaaccgctagaaccctaattgacctagctgcaaaagcaggggaagtggagtta
ttttcaaatgcagaccatccccaatacggattgatcaagagagatgtcagtaaagccaaa
agtcgtgaagttatagaattttttgattctggatttggcatacataatgctggaatgatg
cgttctgaccgaaatttgatggagcgcttgtttgctgatggtctcttgaaagtccttgtt
tgtacagcaacattggcttggggagtaaacttaccagctcatacagttgttataaagggc
acacaattatatgatgctaaagctggcggatggcgagatctggggatgctcgatgtgatg
cagatctttggacgtgctgggaggccacagtttgataaaagtggtgaaggaattattatt
acgacgcatgacaaattggcctattacttgagattattgactagtcagcttccaatagaa
agccagttccttggatcattgaaagataatttgaatgctgaggttgccttgggaactgta
acaaatgtcagggaggcctgtgcctggcttggctatacatacttatttagaaggatgaag
actaatcctctggtgtatgggataacttgggaagaggtgattggagatccttccatgggc
gccaagcaacggtcatttattattgatgctgcacgttcgctagacaaggctaagatgatg
cgctatgatgaaaagagtggcaacttctactgcacagagctcggtcgaattgcaagtcac
ttttaccttcagtactccagtgttgagacatacaacgagatgcttcgtcgtcacatgagt
gaaagtgaggtgattaacatggtggcccattcctctgaatttgaaaatattgtagttaga
gaagaagaacaagatgaattagaaacacttgccaggaaagcatgcccattggaagtcaag
ggtgggccgactgacaagcatgggaaaatttcaattctcatacaggtttttatttcccgt
gcctcagttgacagctcctccttacactctgatgctcaatacattagtcaaagcttgggt
cgcattatgagggcgttgtttgagatttgtctgcgtagggggtggtctgagatgacatcc
ttattattggaatattgcaaggccgtagatcgcaaaatatggccacatctccatcctctt
aggcagttcgatagggacatttctcctgagatattgtggaaacttgaggaaagaaatgtg
gacctggaccgtctttatgaaatggaggaaaatgacgttggagccctcattcgtttttct
catcagggaaggttggttaagcagtatgttggatacttcccacacgtcaacttatctgct
tccgttagtccaatcaccaggactgttctgaaagtggacctgcttataactcctgaattt
gtgtggaaggatcgtcaccatggcatgtcacaacgatggttgattattgtggaggattct
gaaaatgatactatttatcattcggagctcttcacactgacaaagaagatggcaagaggt
acacctacaaagatgtcttttaatataccgatctttgagcctcatccgccgcagtactat
atccgagctgtatcagactcctggctgcattcggagtcaatctttaccgtctcatttcat
aatcttaccttgcctcagacacaaataacacacactgaacttttggacctgaagcctctt
ccactgagtgctcttggcaacaaagcatacgaagatttgtacagatttacccatttcaat
cccatacaaacacaggctttccatgttctttatcacactgaaaccaatgtgctcttggga
gcaccaactgggagtggcaagacaatttctgcagaactagcaatgcttcatcttttcaat
acccaaccggacatgaaggtagtttacattgctcctctaaaggctatagtgcgagaaaga
atgaatgattggagacatcggcttgttactcagcttgggaagaagatggttgaaatgact
ggtgattttacaccagacatggtggccctattatcagctgatatcataatttcgaccccc
gaaaagtgggatgggatcagtcgcagttggcacagtagaagttatgttatgaaggttgga
ctcatgatattagacgagatacatcttcttggagctgaccgtgggcctattcttgaggtc
atcgtatcaagaatgcgatacatatcatcacaaacagaacgttcaattcggtttgttggt
ttatcaacagcattagccaatgctcgggacttggccgattggttgggcgtcagagatgat
ggtctgtttaatttcaagcccagcgtgaggcctgtacctcttgaagtgcatattcaggga
tatcctgggaagttctactgcccgagaatgaatagcatgaacaaaccagcatatgcagcc
atatgtactcattcacctgataaaccagttctcatctttgtgtcatcacgtcgacagacg
agacttacagctcttgatctcattcagcttgcagcatctgatgagaaaccaacgcagttc
ctcagcatggcagataactctctagacatgattctttcacaagtcactgatagcaatttg
agacatacacttcagtttggaataggtcttcatcatgcaggtctaaatgatagagataga
tccttggttgaggaactcttttcaaacaacaagattcaggtactagtatgcactagcaca
ctggcttggggtgtcaatcttccagctcacctggtcataatcaagggtactgaatactat
gacgggaaaacaaaaagatatgttgattatgttatcacagatattctgcaaatgatgggc
cgtgctggccggccacaatatgaccaacatggcaaagctgttattcttgttcatgaacca
aaaaagagcttttataagaagttcttgtatgaaccgttccctgttgaaagtaatctgagg
gagcacttgcacgatcacataaatgcagagattgtttcgagcacaattggtaataaagag
gaggcaattatctatcttacttggacttacctatatcgcagactggttgttaatccatct
tactacggattggaagatactgaaacatataccttgaatgcttatctctcgaggttagtg
gaaactacacttgaagatcttgaagacagtggatgcataaaagtggatgaccattctgtg
cagtctttaattttggggaaaatagcttcacaatattaccttagttaccttactgtctca
atgtttgggtcaaatattggtcccaatacatcattggaagcctttgtgcacatactgtca
gctgctgcagaattcgacgagcttcctgtacgtcataatgaggataccttgaatcgaaca
ctctgtgaaaaggtcccttattcagttgaccagcaccaccttgatgacccacatgttaag
gctaatttactcttccaggcacacttctccagagcagaattaccaattagtgactatatc
actgacttgaagtcaattcttgatcagagcatacgtattatacaggctatgattgatgta
tgtgccaacagtggatggctttcaagtgcattgacatgtatgcatctcttacaaatgatc
atacagggtctctggtttgagagagattcatcactcttgatgttaccatccatgaatgat
aaccttctagatcatcttaaaggcaggggagtttcaacagttctgagcttgctagatcat
tctcgtgaagaattacacaagttgcttcaaccgttttctgctgcagacttgtatcaggat
ctgcaacatttccctcgccttgatgttaaagttaagctacagaatgaagataaggagcag
tcaaaacctcaaatgctgaacattagaatgcaaattaaaaatacacgtcgttcgccaaga
gtattttcctctaaattccctaaggcgaaacaagaagcctggtggctggtcctggggaat
actacaagctcggagctatatggtctgaaaagaattagttttgcagatcgtgtgcttaac
actcgcatggaattgccaccgatgttaaatatccaggaggcaaagctgattgttgtgtca
gattgctaccttgggtttgatcaggaggtctccctggggcatttagcgaaggtctaa
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integrated database retrieval system
