Triticum dicoccoides (wild emmer wheat): 119291421
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Entry
119291421 CDS
T07278
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119291421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119291421
03009 Ribosome biogenesis [BR:
tdc03009
]
119291421
04131 Membrane trafficking [BR:
tdc04131
]
119291421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119291421
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119291421
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119291421
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119291421
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119291421
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119291421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_22
AAA_2
AAA_5
AAA_14
TIP49
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_28
AAA_17
AAA_18
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
ATPase_2
Parvo_NS1
AAA_7
Zeta_toxin
ResIII
NB-ARC
TsaE
DUF815
AAA_lid_PRS2_C
NACHT
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
119291421
NCBI-ProteinID:
XP_037426076
LinkDB
All DBs
Position
4B:complement(553601503..553605787)
Genome browser
AA seq
813 aa
AA seq
DB search
MAAQTSQGEASSSDPKSKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQL
FRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYG
KRVHTLPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPA
EYCIVAPDTEIFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS
IGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISRDTHGYVGADLA
ALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVP
NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAIQRGSSSGD
AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVES
RHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERR
RKDNPEAMEEDEVDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEF
RFPDQPAAGASSAAAADPFASAAAAADDDDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccagacgtcgcagggcgaggcctcctcctccgatcccaagtcgaagaaggac
tactcgacggcgattctagagcggaagaagtcccccaaccgcctcgtcgtcgacgaggcc
acaaacgatgacaactccgtcgtcgccctccaccccgacaccatggagaggctccagctc
ttccgcggcgacacggtccttcttaagggtaagaaaaggaaggacacaatctgcattgtg
cttgcagatgacacttgtgaggagccaaagatcagaatgaacaagaccgtcaggaagaac
ttgagagtgcgacttggtgacgtggtgtctgttcaccaatgccctgatgtcaaatatggg
aagcgggtgcacacgcttcctattgatgacacagttgaaggcattactggaaacttgttt
gatgccttcttgaaaccatacttcctagaagcttaccgtcctttgaggaagggagatctt
ttccttgtgaggggtggaatgagaagtgtggaattcaaagttatagagacagaccctgca
gagtattgcatcgtcgcaccagacactgagatattctgtgatggtgagcctgttaagagg
gaggatgaagaaaggcttgacgatgttggctatgatgatgttggtggagttaggaagcaa
atggcccagatcagagaattggttgaactcccactgcgtcaccctcagcttttcaagtct
attggtgtgaagcctccaaagggcatattgctgtttggaccacctggctctggcaagacc
cttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggccca
gaaattatgtccaagttagcaggagaaagtgagagcaatctcagaaaggcatttgaagaa
gctgagaagaatgctccgtccatcatttttattgatgagattgattcaatagccccaaag
agagagaagaccaatggagaagttgaaaggcgtattgtttcacagctgttgactcttatg
gatgggcttaaatcccgtgcacatgttattgtcatgggtgctacaaaccgcccaaacagt
attgatcctgccctcagaagatttggtaggtttgaccgggagattgacattggagtccct
gatgaagttgggcgccttgaggttctccggattcacaccaaaaacatgaagttggctgaa
gatgtggaactggaacatatttcaagagatactcatgggtatgttggtgctgatcttgct
gctctttgcaccgaggctgctctccaatgcattcgtgagaagatggatattattgatctt
gaggacgagacaatagatgctgagatactcaactctatggctgtgacaaatgaccatttc
aagaccgccctgacgacaagcaacccgtctgctctccgtgaaactgttgttgaagttccc
aatgtttcttgggaagatattggtgggcttgagaatgtcaaaagggagttgcaggagact
gttcaataccctgtggagcatccggagaaatttgagaagtttggcatgtctccttccaag
ggtgttttgttctatggccctcctggctgtggtaaaaccttattggccaaggcaattgca
aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt
ggtgagagtgaggccaatgtgcgtgagattttcgacaaggctagggggtcagcaccatgt
gtgctcttctttgatgagcttgactctattgctatccagagaggaagcagcagtggggat
gctggaggtgctgctgatagagtgctgaaccagctgctgactgagatggatggcatgaat
gctaaaaaaaccgttttcatcattggtgctaccaacaggccagacattatagaccctgcc
ctccttaggccagggcgtcttgatcagcttatctacatccctcttcctgatgtcgagtcg
aggcaccagatcttcaaagcttgcctcagaaagtctcctttggccaaggatattgatctg
agtgctcttgccaagtacactcaagggttcagcggtgctgatatcactgaaatttgccag
cgtgcttgcaagtatgccatcagggagaacattgagaaggacatcgagagggagaggcgg
aggaaggacaaccctgaagccatggaggaggacgaggttgatgaggttgctgagatcagg
gctgcccactttgaggagtcgatgaagtatgctcgccggagcgtgagcgacgctgacatc
cgcaagtaccaggcctttgctcagactctgcagcagtctcgtggattcggcagcgagttc
cggttccctgatcagccggctgcgggcgcttcctctgccgctgcggccgacccttttgct
tccgctgctgcagcagccgacgatgatgatttatatagctaa
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