Triticum dicoccoides (wild emmer wheat): 119291480
Help
Entry
119291480 CDS
T07278
Name
(RefSeq) probable RNA helicase SDE3 isoform X1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119291480
03036 Chromosome and associated proteins [BR:
tdc03036
]
119291480
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119291480
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119291480
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
119291480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
UvrD_C_2
AAA
ATPase_2
Helicase_RecD
Mg_chelatase
DEAD
Terminase_6N
NPHP3_N
AAA_24
AAA_7
Motif
Other DBs
NCBI-GeneID:
119291480
NCBI-ProteinID:
XP_037426136
LinkDB
All DBs
Position
4B:complement(567494487..567499269)
Genome browser
AA seq
1045 aa
AA seq
DB search
MVQILAISHQPSHTLLAAVPSLPHKPTRTAHASPSHRLPLLVLDGDLVQSNPIQSSAGAA
VPPPLRSPAASPDPRLRFAPRTGFKMGHHSDDEYSVAGDKPEVEFMDFQNDNTLQDYQSD
DGPVVVTAPFPFVNGKPKSVLVGETSADAICIENTSCEPVDLWSVRIFSSNPEDSYVLSM
MRPPLNDSVEAAKKAFLGLTSVEDRTLQPGQTLTIWLSCMPKDIGLHTSIVHVDIGDEKI
ERVAFLLADDNVSMALSSDKPYSRRQGSQRKQFECNTFVPGSRPIRQHTQGFKYKLPQYA
IPVEIRELIECKQRPDVLSEELSMINYAKFFSTLLVMEELNLEEEMRSYDMERVSMRRRG
NDYLSLEVPGLAEKRPSLVHGDYIIARHAGSDARPYQGYIHKVEADEIFLRFDDQFHHAH
HDRNKYDVSFTYNRLNMRRQYRSVHDAELIGPDILFPSLSRYRSVKKVPFKPLNPNINTE
QADAVGMILGCRGVTPYVIYGPPGTGKTMTLVEAILQLYKSNRRANVLICAASNSAADHV
LEKLLSSSYPIRPSDIFRLNAPSRQYEDVNPDFIRFCFFEDMVFKCPPMRALMRYKIVIS
TYMSSSTLQAEGIRPGHFTHIFLDEAGQSSEPEAMVPLAALCGRDTVVVLAGDPMQLGPV
VFCKQADQDGLGKSYLQRLLGEFEQYHSGDPNYVTKLLRNYRCHPAILELPSQLFYEGEL
IPCKGDEVPSVYDCIGLPNKSFPVLFVGIQGCDEREGNNPSWFNRIEVSKVVNIIRTLTR
NGDVSEADIGVITPYRQQVNKIKKALETFEMPDLRVGSVEQFQGQEREVIIISTVRSTVK
HNEFDRFFNLGFLSNYRRFNVAITRAKSLLIVVGNPHIITKDRHWDKLLRYCADNGSYQG
CPLPPPEEEVRYSGYGDTRDQPAGDGWGYNQEELANHIHNQDPSDSGFRHDNGRSSTAHE
AEWPEVKPDGDYHSYPDAGAEPQEETQQKQQHVEEGATTGQDGVQAGRWSANDVDDGAVQ
DAYVQKYTFPPGWGDVSSIPATGWE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggtacagattctcgccatcagccatcagccatcacacaccctcctcgctgcagtcccc
tcccttcctcataaacccacccggactgctcatgcctccccctcccaccgcctccccctc
ctcgtcctggacggggacctagtccaatccaatccaatccaatcatctgctggtgctgcg
gttcctccccctctccgatcgccggccgcctcccccgacccgcgcctgcgcttcgctccg
aggacaggattcaagatggggcatcattcagatgatgagtactcagtagccggtgataag
ccggaagtagagttcatggattttcagaatgacaacactcttcaggactatcaatctgat
gatggtcccgtggttgttacggctcctttcccttttgtgaatggaaagcctaaatctgtc
cttgttggagaaacatctgcagacgccatttgcatagagaatacctcttgtgagcctgta
gatttatggagtgtgagaatattctcttcaaatccagaagatagttatgtcttgtcaatg
atgagaccaccgttgaatgattccgttgaagcggcaaagaaggcttttcttggtttgact
tctgtggaagatcgtacacttcagcctggacaaaccctaaccatttggctgtcctgtatg
ccaaaagacattggtttgcatacatcaatcgtgcatgttgatattggggatgagaagatt
gagcgtgtggcttttctgttggccgatgataatgtttcgatggccttatcttctgataaa
ccttattccaggagacaaggctctcaaaggaagcaatttgagtgtaatacatttgtgcca
ggtagccggccaattcggcagcacactcaaggattcaagtataagctacctcagtatgca
atacctgtagaaatccgtgagctcattgaatgtaaacagagacccgatgtcctatctgaa
gagctgagcatgataaactatgcaaagttctttagcactcttttagtcatggaagaactt
aatttggaggaggaaatgagatcatacgacatggagcgtgtctcaatgagaaggaggggt
aatgattatttgtcgcttgaggtccctggtttggcagaaaaaaggccttcactagttcat
ggagactatataattgccagacatgctgggagtgatgccagaccttatcagggctacatt
cacaaggttgaagctgatgagatatttttgaggtttgatgatcagtttcaccacgctcac
catgacaggaataagtatgatgttagcttcacatataatagattgaacatgagaaggcaa
tataggtctgtccatgatgcagaacttattggacctgacattctattcccctccctatca
cggtatagaagtgtgaagaaggtgccatttaaacctctgaacccaaacataaacactgag
caagctgatgcagttgggatgatacttggctgccgaggggttacaccatacgtgatttat
ggacctccaggaactggcaagaccatgacccttgtcgaggcgattttgcagctttataaa
tccaataggagggcaaatgttctcatatgtgctgcttccaatagtgctgctgaccatgta
ttggaaaaactgctgagttctagctacccgatccgcccaagtgatatctttaggctaaat
gctcctagtcgtcagtatgaggatgttaatcctgatttcatacggttctgcttctttgaa
gatatggtgttcaagtgccctccaatgcgagcattaatgcgctacaagatagttatatca
acctacatgagttcatcaaccctacaggctgagggtattcgcccggggcatttcacacac
attttcttggatgaggccggtcaatcttctgaaccagaggcaatggttcccttggcagct
ttgtgtggaagagacacagtggttgtgttagcaggagatcctatgcaattagggccggtg
gttttttgtaagcaggcggatcaggatggtttgggcaaatcttatctgcaaaggctgctc
ggtgaatttgagcagtaccattcaggggatcctaactacgtgacgaagctattgaggaac
tatcgttgccatccagcaatcctagagctaccgtcacagcttttctacgagggtgaactt
atcccctgtaagggagatgaagtgccatctgtttacgattgcattggccttcccaataag
tcattccctgttctgtttgttggaatccagggatgcgatgagagagaaggcaacaatcca
tcatggttcaacagaatcgaagttagtaaagtagtaaatatcatcaggactctgacaagg
aatggcgatgtcagtgaggctgatattggtgtcattactccatatcgtcaacaagttaac
aagataaagaaggccctagagacgtttgaaatgcccgacctaagagtgggaagtgtcgag
caattccagggccaagaaagggaagtgatcatcatctcgacagtcaggtcaaccgttaag
cacaacgagtttgacagattcttcaacctgggattcctgagcaactacagaaggttcaat
gttgcaattactcgtgccaagtcgttgctaattgtcgtgggaaaccctcacatcatcact
aaggatcgacactgggataagctcctgaggtactgcgcagacaatggttcttatcaagga
tgtccactccccccaccagaagaagaggtcagatactcgggatatggcgacacccgagac
cagcctgctggtgatggttgggggtacaaccaagaggagctagcaaaccacatccacaat
caagacccgtctgacagtggcttcagacacgacaatggccggtcctcaaccgcacacgaa
gctgaatggcctgaggtgaagccagacggggactaccattcgtatcccgacgcaggagca
gaacctcaggaggagacacagcagaagcagcagcacgtcgaggaaggggctactaccgga
caggacggcgtgcaggctggccggtggtcagccaacgatgtcgacgacggtgcggtccaa
gacgcatatgtgcagaagtacacgtttcctcccggttggggtgacgtctcaagcatcccc
gcgacaggctgggagtga
DBGET
integrated database retrieval system
