Triticum dicoccoides (wild emmer wheat): 119291510
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Entry
119291510 CDS
T07278
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119291510
03460 Fanconi anemia pathway
119291510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119291510
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119291510
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119291510
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Topoisomerases
119291510
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119291510
FA (Fanconi anemia) pathway
119291510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
SASP_SspL
Motif
Other DBs
NCBI-GeneID:
119291510
NCBI-ProteinID:
XP_037426173
LinkDB
All DBs
Position
4B:complement(575043165..575053080)
Genome browser
AA seq
778 aa
AA seq
DB search
MLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEG
TASFIWIRGHLFDYSSAVVIYEMCVHEPMATVQNVRNQEKLKYPPYPLSTVELQKRASRC
CRMSSEHTMKVAEELYQAGFISYPRTETDSFSPNTDLHAIVREQVDHPDWGTYAQRLLNP
EERLWRNPSNGGHDDKAHPPIHPTKFSTGENNWSPDHKKVYELVVRHFLACCSQPAVGAE
TTVEVDIAGEQFNASGRVVLAKNYLDVYRYDSWGGSLLPTYTIGQQFVPTSLTLDSGVTR
PPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYATKDANSRFSPTNLGEALVMGYD
EMGYELWKPYLRTMMESDMKSVSVGTKSKAQVLEGCLQQMKACFLDARANKVKLLDAMGT
FFARSNRPINETQNTIEVVRPCGACNDSEMLLKRRPNGGFMVGCRGFPQCRNVVWLPGSL
AEAAVTQQICPTCVPGPVYKIQFKFNRRDIPPSFDVDHLGCIGGCDDVLKELTEMSRFQH
HNQTTTPARSQSQTQTTSTSGVRQGAPRQDLPTGSRSTGQFANQHTPAVNPQGRGQSQTP
SGVGVRQGTPRQDLHTVFRTASQFANEQQTPGVNPQGFRSTHTGLTQNSRNASSSGEVLC
TTCGEACINRTANTEANRGRKFYKCQNPGCGFFVWEDELDNVAPRGRGRGSRGGGRQASA
SASASAGRRGGGRGRRGRGNADADGMTFVSATGDTVHGCCFTCGDPSHFANACPNRGR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgctgctaaaagatgcatttgtccttgatgtcagtggggaagaaaggaatatggttctg
agctatggtccttgccagtttccaactctaggatttatagttgagcgtttctgggagata
caagctcacgaacctgaagagttctggacaataaattgttctcacacttcagatgaaggc
accgcgtcgtttatttggatacgtggccatttgtttgattactcatccgctgttgtgatc
tatgaaatgtgtgtccatgaaccaatggcaacagtacagaatgtcaggaatcaggagaaa
ctaaaataccctccatacccactaagtaccgtggagcttcagaaacgtgcttctaggtgc
tgcagaatgagttcagagcacacaatgaaggtggctgaagaactttaccaagctggattc
attagttatcccaggacagagactgatagtttctctccaaacactgatctgcatgcaatt
gtacgtgaacaagtggatcatcctgattggggaacgtatgcccaacgtcttctgaatcct
gaagaaaggctctggagaaatcccagcaatggtggtcatgatgacaaggcacatcctcct
attcatccaacaaagttttcgactggtgaaaacaactggtctccagaccacaagaaagtg
tatgagctagttgttcgccatttccttgcttgttgctcccaacctgcagttggagccgag
acaactgtggaagttgacattgccggtgaacagttcaatgcatcagggcgtgtcgtactt
gctaaaaattatttggacgtttatcgttatgactcatggggtggttcattacttccaaca
tacaccatcggacagcagtttgttccgacgtctttaacacttgattcaggagtaactcga
ccaccacctcttcttgctgaagctgacctccttagctgcatggataaagcaggaatcggc
accgatgcaaccatgcatgaacacataaaaaagctacttgaccgttgttatgcaaccaaa
gatgcaaattcacgtttctccccaacaaatcttggggaggcgttggtaatgggttatgat
gaaatggggtatgagctttggaaaccttatttacgaacaatgatggaatctgacatgaaa
tcagttagtgtcggtacaaagagtaaagcgcaagtacttgagggttgtttgcagcagatg
aaggcttgttttctggacgcaagggcaaacaaagtgaagctccttgatgcaatgggaaca
ttctttgctaggtcaaatagacctatcaatgagacacaaaataccattgaagttgtaaga
ccctgtggtgcatgcaacgactctgaaatgttgctgaagcgaaggccgaatggtggtttt
atggttggctgtcggggctttcctcagtgtagaaatgtagtatggctgcccgggtccctt
gcagaagctgctgtgacgcaacaaatttgtcctacctgcgttccaggtcctgtttataag
atccaatttaagttcaaccgaagggatatcccaccaagtttcgatgttgatcacctgggt
tgcattggtggatgtgatgatgtactcaaagagcttacagagatgagtagatttcaacat
cataaccagactacgacgccagcaagaagccaaagccagactcagactacatctacgagt
ggtgtaaggcagggggctccaaggcaggatttacctactggttctcgttcaacggggcaa
tttgctaaccagcacacacctgctgtgaacccccaagggagaggtcaaagccagactccg
agtggtgtcggagtaaggcaggggactccaaggcaggatttgcatactgtttttcgtacg
gccagccagtttgctaatgagcagcagacacctggtgtgaatccacaaggctttcgttcg
acccacacgggcctcacccaaaactcaagaaatgcatcatcatcaggtgaagtactctgc
actacatgtggagaggcctgcataaatcgaacggctaatacagaggcgaacagagggagg
aagttctataaatgtcaaaatcctggatgcggcttttttgtatgggaagacgagctggat
aacgtggcgcccaggggccgtgggcgcggcagccgcggtggcggcaggcaagcatccgcg
tccgcatctgcatcggcaggtcgtagaggcggcgggcgaggcaggaggggccgggggaac
gccgacgccgacggcatgacgttcgtctcggcgaccggcgacaccgtgcacggctgctgc
ttcacctgcggcgacccttcccacttcgccaacgcatgcccaaaccgtgggagatag
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