Triticum dicoccoides (wild emmer wheat): 119292048
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Entry
119292048 CDS
T07278
Name
(RefSeq) endoribonuclease Dicer homolog 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119292048
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119292048
microRNA pathway
RISC loading complex
119292048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
dsrm
DND1_DSRM
Helicase_C
DEAD
ResIII
Dicer_dsRBD
Dicer_PBD
SWI2_SNF2
SNF2-rel_dom
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
119292048
NCBI-ProteinID:
XP_037426776
LinkDB
All DBs
Position
4B:651966749..651977954
Genome browser
AA seq
1979 aa
AA seq
DB search
MAGGGEQPGAVSYWYDACEDEDDPSLLFDFAASADFGPGLMPVMDSSGINFAASAGFDPA
AMGCGIDFASADFDPGLLPAMDCGVEDGLVDEIDRILESINDESAPAPAPQPPPPSQPVA
PQPPAERAQEAAAAAVANNAVAVVGSGQRSQAVEPRRETRSVEPRKEIRSLDPKKETRSL
DPWKETRRESYGGSMNGGRGGEWRDGKRPRLAPGAHGEPRPDSRRRPMLPPPSRGWEERR
GRRDFVDRPRKRDRDSNPAHRREARGFWERDRGGKMVFRTGTWEQESEREGKRARTHNGG
SVEKTAEADKAASAQKEKPLAEEQARHYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIK
SICDKMMKENRKILAVFLVPKVPLVYQQAEVIRERTGYRVGHYCGEMGQDFWDARKWQRE
FDSKQVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDK
RPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPFEVVVQ
YDKAATLCSLHEQIKQMEAAVEEAALCSSKRTKWQFMGARDAGSRDELRLVYGVSERTES
DGAANLIQKLRAINYALGELGQWCAYKVAQSFLTVLQNDERANYQVDVKFQESHLKKVVD
LLHCQLTEGAAVKSETNDVEMHNTENHNPSELEDGELPDSHAVSVGEHVDEVIGAAVADG
KVTPRVQALIKILLKYQHTDDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNN
NQEMRTSQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYVQSRGR
ARKPGSDYILMVERGNLAHETFLRNARNSEETLRKEAIERTDLSHLDGTLLNSIDTSPDS
MYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMQKHEKPGGSMEYSCKLQLP
CNAPFEKLEGPICGSIRLAQQAVCLAACKKLHEMNAFTDMLLPDRGSGEGEKTEQNEGDP
LPGTARHREFYPEGVAEILRGEWILCGRDGCQSTQFIKLYMYSVNCVDVGTSKDPFLAQL
SNFSIIFGSELDAEVLSTPMDLFVARTMITKASLVFRGPIEVTESQLVLLKSFHVRLMSI
VLDVDVDPSTTPWDPAKAYLFVPVGTEKCTDALREIDWTLVNSIVNTDAWNNPLQKARPD
VYLGTNERTLGGDKREYGFGKLRNGTAFGQKAHPTYGIRGAIADFDIVKASGLVPSRDRG
YSSDYQNQGKLFMADSCWDAKDLSGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLG
PLEYSSYADYYKQKYGVELVYKKQPLIRARGVSYCKNLLSPRFEHSEAREGDFSENVDKT
YYVYLPPELCLVHPLPGSLIRGAQRLPSIMRRVESMLLAVQLKETIDYPVPAVKILEALT
AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALN
KTLQSYIQADRFAPSRWAAPGVLPVFDEETRESEPSIFGEGSIPGNEVQKDYDDDYTDSI
QEEGEIDGDSSCYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPQEIP
PPKPYNIPESILKGIDFETLEGILGMKFQNKGFIIEAITHASRPSSGVSCYQRLEFVGDA
VLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVRRKLHGHLRHGSSALEKQIR
EFVKDVREEISKSGFNSFGLGDCKAPKVLGDIIESIAGAVFLDSGYDTSAVWKVFQPLLE
PLVTPETLPMHPIRELQERCQQQAEGLEYKASRAGNVATVEVFVDGVQIGVAQNPQKKMA
QKLAARNALVVLKEKETAAKKETEKDGDKNNAGFTRQTLNDTCLRRQWPMPQYRCINEGG
PAHAKRFVYAVRVNTSDRGWTDECVGEPMPSVKKAKDSAAMLLLELLNRSFPEKPDGKK
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggaggcgagcagccgggagcggtgtcctactggtacgacgcgtgcgaggac
gaggacgacccgtcgctgctcttcgacttcgccgcgtccgccgacttcggcccggggctc
atgcccgtcatggacagcagcggcatcaacttcgccgcgtccgcgggcttcgacccggcg
gccatgggctgcggcatcgacttcgcgtccgcggatttcgacccgggcctcttgcccgcc
atggactgcggcgtcgaagacggcttggtcgacgagatcgaccggatactcgagagcatc
aacgacgagagcgcccccgcccccgcaccgcagccgccgccgccgtctcagcctgtggct
ccccagccgccagcggagcgggcgcaggaggctgctgctgcggctgtggccaacaatgcc
gtggcggtggtgggctcagggcagaggagccaggccgtcgagcctaggagggagacgaga
agcgtcgagcccaggaaggagattagaagcctcgacccgaagaaggagactagaagcctc
gacccgtggaaggagacgagaagggagtcgtacggcggttccatgaacggcggtcgcggc
ggggagtggagagacgggaagcgtcctcgcctcgcccctggggctcacggggagccgcgc
cctgattcgcggcggcggccgatgcttccgccgccctcgcgtggctgggaggaacggcgc
gggaggcgcgacttcgttgacaggcctcgcaagcgcgaccgcgacagtaaccctgcccac
cgccgcgaggctcgagggttctgggagcgggaccgcggcggcaagatggtgttccgcact
ggcacctgggagcaggagtctgagcgcgagggtaagcgtgccaggacacacaacggaggc
tccgtggagaagactgcagaggcggataaggcggcttccgcccagaaggagaagcctctc
gccgaggagcaggcgagacactaccagttggaggtgcttgagcaagcaaagagcaggaac
accatagccttcctcgagaccggcgcggggaagaccctcattgctgtgctgctcatcaaa
agcatatgtgacaaaatgatgaaggagaacaggaaaatacttgctgtgttcttggttccc
aaggtgcctcttgtgtatcagcaagctgaggtgatacgcgagaggactggctatcgggtc
gggcactactgtggagagatgggtcaggatttctgggatgctagaaagtggcagcgcgag
tttgattcgaaacaggtactagttatgacagctcaaattttgttaaacatcctcaggcac
agtatcattaaaatggatgccatacatcttttaattttagacgagtgccatcatgcagtg
aaaaaacatccatattctctagtgatgtcagaattttatcacacaactccgaaggataag
agaccagttgtttttggtatgacagcttctcctgtcaacctaaagggagtcactagccaa
gaagattgtgccatcaagataagaaatcttgagagtaaactggattccattgtttgtact
atcaaagatcggaaagagcttgagaaacatgtccccatgccttttgaagtcgttgtccaa
tatgacaaagcagccaccctttgttccctgcatgagcagatcaaacaaatggaagctgct
gttgaagaagctgcactctgtagctctaagagaacaaagtggcagtttatgggagccagg
gatgctgggtctagagatgagctgcgccttgtctatggtgtttctgagcgtacagaaagt
gatggtgcagctaatttaatccagaagttgagagctataaattatgctttaggtgaacta
ggacaatggtgtgcttataaggttgcacagtcctttttgacagtattgcagaatgatgaa
agggcaaactatcaggttgatgtaaagtttcaagagtcgcatttaaagaaggttgttgat
ttattgcactgccagttgactgagggagctgcagtgaaaagcgagacgaatgatgttgag
atgcataacactgaaaatcacaacccaagtgaacttgaagacggggagctgcctgatagc
catgctgtttctgtaggtgaacatgtagatgaggtcattggagctgccgtggcagatggg
aaagttacccctagggtgcaggctttaatcaaaatccttctcaagtatcagcatactgac
gatttccgtgctatcatctttgtggagcgagttgtcacggcattagttcttcctaaggtg
cttgcagagcttccatctttaagctttatccgatgtgcaagcttgataggtcataacaac
aatcaagagatgcgcacaagccaaatgcaggataccattgcaaaatttcgtgatggccga
gttacactgttagtcgcgactagtgttgctgaggaaggacttgatattcgacagtgcaat
gttgtcattcgctttgaccttgcaaagacggtcttggcctacgtacagtctcgtggtcgt
gcaagaaagcctgggtctgactacatattgatggttgaaaggggaaatctggcacatgaa
actttcttgaggaatgctcgaaatagtgaggagacgttgagaaaagaggctatagaaaga
actgatctcagtcatcttgatggtactctgctaaattccattgatacatcacctgattcg
atgtatcaggtcgaatcaacaggtgctgttgtcagcttgaattctgcagttgggctcgta
catttttactgttcacagctaccaagtgacaggtactcaattcttcgtccagaatttatt
atgcaaaaacatgagaagccagggggttccatggagtattcctgcaaacttcaacttccc
tgtaatgctccatttgagaaacttgagggtcctatatgcggctcaattcgtctggcacaa
caagctgtttgtttggctgcctgtaagaagctgcatgagatgaatgccttcacagatatg
cttttacctgatagaggaagtggagaaggagagaagaccgaacagaatgaaggtgatcca
ctccctggaacggcacgccatagagagttttatcctgaaggtgttgctgaaattttgaga
ggagaatggattttatgtggaagagatggctgccaaagcactcaatttattaagttgtat
atgtattctgtcaattgtgtggacgtagggacatctaaggaccctttccttgcacaactt
tcgaatttttctattatttttggcagtgagttggatgcagaggttctatcgacgccaatg
gatctctttgttgccaggacaatgataacaaaggcatctcttgtattccgtggaccaatt
gaagttacagaaagtcagctggttctgctgaagagctttcatgttaggctcatgagcata
gtccttgatgttgatgttgatccctcaactacaccttgggatccagcaaaagcatacctg
tttgtccctgtaggaactgagaagtgcacagatgctttaagagagatcgattggactttg
gtcaacagcattgtgaatactgatgcctggaataatccacttcaaaaggcacgaccagat
gtctacctaggcaccaatgagaggacacttggtggagataagagagagtatgggtttgga
aaattgcgtaatggaaccgcttttggacagaaggcacatccgacttatggtattagagga
gccattgctgactttgatattgtcaaagcatctggattagttccttctcgtgatagaggt
tattcaagtgactatcagaatcaaggcaagttgttcatggcagattcatgctgggatgct
aaagatctttctggaatggttgtcactgctgcccactcaggaaagcggttctatgtggac
tgtatttgctataacatgaatgcagaaaattcatttcctaggaaggaaggctacttgggg
cctctggaatatagctcatatgccgattactacaagcagaaatatggtgtggagctagtg
tataagaaacaacctcttatacgtgcacgtggtgtttcctattgcaagaatcttctgtct
cctagatttgagcattctgaagctagagaaggtgacttttcggagaacgttgacaaaaca
tactatgtgtatttaccacctgaactttgccttgtgcacccccttcctggatcacttatt
cgtggagctcaaaggttgccatcgataatgagaagggttgagagtatgcttcttgcggtt
caattgaaggaaacaattgattatcctgttcctgcagttaagatattagaagccttgact
gctgcatcatgccaggaaacattctgctatgaaagagcagagttactgggtgatgcatac
ctgaaatgggttgtgagtagattccttttcctaaaatatcctcagaagcatgagggacag
cttacaaggatgcgacagcagatggtcagtaacatggtcctctaccaatttgccctgaat
aaaactcttcaatcgtatattcaagcagatcggtttgccccatcaagatgggcagctcca
ggagtactacctgtatttgatgaggagactagagaatctgaaccgtccatctttggtgag
gggtcaatacctggtaatgaagtacagaaggattatgacgatgactacacggatagcatt
caagaggagggtgaaattgacggagattctagctgctatcgtgttctctcaagcaagact
ctagcagatgtcgttgaagcacttattggggtctattatgtagcaggagggaaaattgct
gcaaaccacctaatgaagtggattgggattcatgccgagttggatcctcaagagatccct
cctccgaagccatataatatacctgagagcatattgaaaggcattgactttgagacattg
gaaggcatcttgggtatgaaattccagaataaaggttttattattgaggctataacgcat
gcatccaggccatcttctggtgtttcctgttaccagcggttggaatttgttggtgatgct
gtgttggatcatctcatcacaaagcatctattttttacatatactgatctacctcctggt
cgcttgactgacctgagagctgcagctgttaataatgaaaactttgcaagggttgcagtt
agacgtaagctgcacggacatcttcgtcatggatcatctgcactggaaaaacagattcgg
gagttcgtgaaggatgtccgagaagagatttcaaaatcaggtttcaattcttttggacta
ggggactgcaaggctcctaaagttcttggagacattattgagtctattgctggggcagta
ttcctggatagtgggtatgacacctcggcagtctggaaggtgttccaaccgctccttgaa
cctctggtaacgccagagacccttccgatgcatccgattagggagctccaagaacggtgc
cagcaacaagcagaaggcttagaatacaaagcatcccgggcaggcaatgtagctactgtt
gaagtctttgttgatggtgttcagattggtgtagctcagaatccccagaagaaaatggca
cagaagttggcggcgaggaacgcacttgtggtcctgaaggagaaggaaaccgcagcaaag
aaagagaccgaaaaggacggtgataagaacaatgccgggttcaccaggcagaccctgaac
gacacttgcttgagaaggcagtggccgatgccacagtacaggtgcataaacgagggcggc
cctgctcatgctaaaagatttgtctacgcggtcagggtgaatacatccgatcgcggatgg
accgacgagtgcgtcggagagccgatgccgagcgtgaagaaggccaaggactctgccgcg
atgcttctcctcgagcttctgaaccgaagtttccctgaaaagcctgacggtaagaagtga
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integrated database retrieval system
