Triticum dicoccoides (wild emmer wheat): 119292232
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Entry
119292232 CDS
T07278
Name
(RefSeq) coatomer subunit alpha-3-like
KO
K05236
coatomer subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119292232
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119292232
Membrane trafficking [BR:
tdc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119292232
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119292232
Exosomal proteins of bladder cancer cells
119292232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Fis1_TPR_C
ThaI
ENTH
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
119292232
NCBI-ProteinID:
XP_037426957
LinkDB
All DBs
Position
4B:670000316..670005547
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLAFHPRRPWILASLHSGVVQMWDYRMGTLLDRFDEHDGPVRGVHFH
KTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEHPWIVSASDDQTIRVW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSSSPADDIMR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWVLAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDTVFYVKDRFLRFYEYSTQKEVQVAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDVDGGSYELFIVPKDSAGRADYLQDAKKGSGGSAVF
IARNRFAVLEKSSNQVLVKSLKNEIVKKSPLPIGTDVIYYAGTGNVLCRAEDRVAIFDLQ
QRLVLGELQASAVKYVIWSNDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYSTLNHIKYCLPNGDSGIIKTLDVPIYITKVAGNTIAFLDRDGKNKIITVDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKELDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFDRLAFLYLLTGYLDKVGF
MSKIAGQNNNLMGQFHNALYLGDAKKRVEILENAGQLPLAYVTAATHGLPEIAERLAGEL
GEDVPSLPEGKTRSLLIPPAPLTACGDWPLLRVMRGIFEGGLDATGRAEQEEDYDDAGGD
WGDEDLEIVDASNVIENGDAGHADESETNEEDGEEEGGWDLEDLELPPEADTPKASGPAR
SALFVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKALFLDAH
MGSHTFLRAFASAPVIPIAVEKGWSESASPNVRGPPALVFSFAQMDDKLKAAYKATTEGK
FPEALRQFLNILYTIPLLVVDSRREVDEVKELIEIVREYVLGLRMEVKRKELKSDATRQQ
ELAAYFTNCKLQKVHMRLVLTSAMGLCFKGGNYATAANFARMLLDNGPNEAQAKKARQVL
QACGDRKDAHQLNYDFRNPFVVCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICEL
SVVGADASGLLCSPTQSR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagcaaccgcgtcaaggggctggccttccacccgcgg
cggccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg
ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac
aagacacagccgctcttcgtatccggaggtgacgattacaagatcaaggtgtggaactac
aagacgcaccgctgcctcttcacgctccacggccaccttgactacatccgcacggtccag
ttccacgacgagcatccatggatcgtcagtgccagcgatgaccagacaatccgtgtctgg
aactggcagtcgcgcacctgcgtggccgtgctgacggggcacaatcactatgtcatgtgt
gcctccttccatcccaaggaggacctggtcgtgtcagcgtctctggaccagaccgtccgg
gtgtgggatattggcgcgctcaggaagaagtcgtcatccccagccgacgacatcatgcgt
ctcactcagatgaacactgatctgtttggaggcattgatgctgtggtcaagtatgtcttg
gagggtcacgaccgtggggtcaactgggcatcgtttcaccccacgctgccacttattgtt
tctggggcagatgaccggcaagtgaaactctggagaatgaatgatacaaaggcatgggag
gttgatactcttagaggtcacatgaacaatgtctcctgtgtattgttccatgcgaagcag
gacatcattgtatccaactcagaagacaagagcatccgtgtctgggatgccacaaagaga
actggtatccagacattcaggcgggagcatgaccgcttctgggtccttgctgctcaccct
gaaatgaatcttcttgcagctggtcatgacagtggcatgattgtgtttaagttggagaga
gagcgcccagctttcgccgttagtggtgatacagtgttctatgtgaaggaccgcttcctc
cgtttctatgagtactcaacacagaaagaggtccaggtggctccgataagaaggcctggg
tcagtcagcttgaatcagtcaccaaggacattatcatatagcccaactgagaatgctgtc
ttgatctgctctgatgtggatgggggctcatacgagcttttcattgttcccaaagattct
gctggcagggctgattatttgcaggatgcaaagaagggatctggtggttctgcagttttc
atagcccggaacaggtttgcagtcctagagaagagcagcaaccaggttttggtgaagagt
cttaagaatgagattgtgaagaaaagccctcttcctattggaactgatgttatttactat
gctggaactggtaatgtattgtgcagagctgaagacagggtggccatctttgatctgcag
cagcggcttgttcttggtgaactccaggcatctgctgttaagtatgtgatctggtcgaat
gatatggagtctgttgcactactcagcaaacatgctgtagtcattgcaaacaagaagctt
gtccatcgctgcacacttcacgaaacaatacgtgtgaagagtggtgcctgggatgaaaat
ggtgtgttcatatattccactctgaaccatatcaagtactgccttcctaatggggacagt
ggcattatcaaaacacttgatgttcctatttacataaccaaggttgcggggaacaccatt
gcctttctggaccgtgatggaaagaacaagattattacagttgatgcttctgaatacatt
ttcaagctggcccttctacggaagcgctacgatcatgttatgagtatgattaagaactca
cagctgtgcgggcaggcagtcatttcttatttgcaacagaaaggatttccagaagttgct
ctccactttgtgaaagatgagaagaccagatttaacctggctcttgaaagcgggaacatc
caaattgctgttgcctccgcaaaagagcttgatgacaaggatcactggtacaggttggga
attgaggctctgaggcagggaaatgttggtattgttgaatatgcataccagcggacaaag
aattttgacaggcttgcttttctttatctgctaactggttacttggacaaggtgggcttc
atgtctaagatagctgggcagaataacaatttgatgggccagttccacaatgcattgtat
cttggagatgccaagaaaagagttgagatcttggagaatgcaggacagctacctctagca
tatgtgactgctgccactcatgggctccctgaaattgccgagaggcttgctggtgagtta
ggagaagatgtgccttctctacctgaagggaaaactagatcacttttaatccctccagca
cctctcacagcttgtggtgattggccattgttgagggtgatgcgtggtatttttgagggt
ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat
tggggtgatgaagacctggaaattgttgatgccagtaatgtgatagaaaatggagatgct
ggccatgccgatgaaagtgaaacaaatgaagaggatggggaagaggaaggtggctgggac
cttgaagatctggaattgccgccggaggcagatacaccaaaagctagtggtccggcccgc
tctgctctgttcgtggctcccacaccaggcatgcctgtcagtcaaatttggactcagaag
tcatctcttgctggggagcatgctgcagctgggaattttgacacagcaatgcgtctgctt
agccgccagttgggcatcaagaactttgctcctttgaaggccttgtttcttgatgcgcat
atgggcagtcatacctttctgcgtgcgtttgcaagtgctccagtgatacctattgctgtt
gagaaaggctggagtgaatctgccagtcccaatgtgaggggcccacctgcacttgtgttc
agctttgcgcaaatggacgacaagctgaaggctgcctacaaagccacaaccgagggcaag
ttcccagaggcactgaggcagttcctcaacatcctatacaccatcccgctcctcgtcgtg
gactcgcggagagaggtcgatgaggtgaaggagcttatcgagatcgtgagggagtacgtc
cttggtctcaggatggaagtcaagaggaaggagctgaaaagcgacgccacccggcagcag
gagctggcggcatacttcaccaactgcaagctgcagaaggtccacatgcgcctcgtcctc
accagcgccatgggcctctgcttcaagggcgggaactacgccacggcggcaaactttgcc
cgcatgctcctggacaacggcccgaacgaggcccaggcgaagaaggcccggcaggtcctg
caggcctgcggcgacaggaaggacgcccaccagctcaactacgacttcagaaacccgttt
gtcgtctgcggggccaccttcgtcccgatctaccgcgggcagaaggacgtgtcctgcccc
tactgcgcgtcccggttcgtgccctcggttgagggtcagctgtgcagcatatgcgagctc
tcggtggtcggggcggacgcctcgggcctcctctgctcccctacacaatcgagataa
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integrated database retrieval system
