Triticum dicoccoides (wild emmer wheat): 119292331
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Entry
119292331 CDS
T07278
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119292331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119292331
Spliceosome [BR:
tdc03041
]
Common components
Common spliceosomal components
SR proteins
119292331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Nup35_RRM_2
RRM_5
SET_assoc
RRM_3
DbpA
PHM7_cyt
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119292331
NCBI-ProteinID:
XP_037427076
LinkDB
All DBs
Position
4B:complement(679026249..679028996)
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AA seq
273 aa
AA seq
DB search
MRPVFCGNFDYETRQSDLERLFSKYGPIRRIDMKSGYAFVYFQDERDAEDAIRRLSNAEF
GQTSRRLSVEWSRQEEPVPKNRDRPTGADAKPTRTLFVINFDPIRTKVVDIERHFEPYGK
IANIRIRKNFAFVQYEAQEDASVAVNKTDKSTILDRVVTVEYAFRDDDNERDDRHGSPRR
GGDRYGSPRRGGDRYGSPRRGGDRYGSPKRADQGRRPYVRSPSPRYRRDYSPDYDRRPRN
SGYDRRDGAPYGRSRSPVYDRYERGRSPGYGRY
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttctgcggcaacttcgactacgagacgcggcagtcggatctggagcgc
ctcttctcaaagtacggacccatccgccgcatcgacatgaaatccggctacgcctttgtc
tacttccaagacgagcgcgacgccgaggatgcaataaggcgcctcagcaacgccgagttc
ggccagaccagccgcaggctctccgtcgaatggtcaaggcaagaggagccggtccccaag
aaccgcgacaggcctacaggggcagatgcaaagcccaccaggacgctctttgttatcaac
tttgaccccatccgcaccaaagtcgtcgacatcgagaggcattttgagccctacggcaag
attgcaaacattcgtatccgcaagaactttgctttcgtgcagtacgaggcgcaggaggac
gccagcgtagccgtcaacaagaccgacaagagcacgatattggacagggtagtgacggtt
gaatacgccttccgggatgatgacaatgaaagagatgacagacatggcagtcccaggcga
ggcggtgacagatacggcagcccgagacgagggggtgacagatatggcagtcccagacga
ggcggtgacagatatggcagtccaaaaagagctgaccagggcaggcgtccctacgtgcgg
tcccctagccctaggtaccgaagggattacagtccagattacgatcgccgtccacgtaat
tctgggtatgatcgccgcgatggagcaccctatggtaggagccgaagccctgtgtatgat
cgttatgaaagaggcaggagccccggctatggtcgttattag
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