KEGG   Triticum dicoccoides (wild emmer wheat): 119292354
Entry
119292354         CDS       T07278                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like isoform X1
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119292354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119292354
   03041 Spliceosome [BR:tdc03041]
    119292354
   03032 DNA replication proteins [BR:tdc03032]
    119292354
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     119292354
Spliceosome [BR:tdc03041]
 Complex A
  U1 snRNP components
   Sm proteins
    119292354
  U2 snRNP components
    119292354
 Complex B
  U1 snRNP components
    119292354
  U4/U6.U5 tri-snRNP components
    119292354
 Complex C
  U2 snRNP components
    119292354
DNA replication proteins [BR:tdc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     119292354
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 119292354
NCBI-ProteinID: XP_037427097
LinkDB
Position
4B:681638267..681645859
AA seq 135 aa
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRAVAMRARAAGGRGGG
PPVGGGRGGAPPVRR
NT seq 408 nt   +upstreamnt  +downstreamnt
atgagccgcagcctggggatcccggtgaagctgctgcacgaggcggcggggcacgtggtg
acggtggagctcaagaccggcgaggtctaccggggctccatgatcgagtgcgaggacaac
tggaactgccagatcgagaacatcaccttcaccgcaaaggacggcaaggtgtcgcagctg
gagcacgtcttcatcaggggcagcagggtccgcttcatgatcatccccgacatgctcaag
aacgcacccatgttcaagcgcctcgaggccaggataaggggcaaggggtcggccatcggc
gtcgggcgcggccgtgccgtcgccatgcgtgcccgggctgctggtggtcgtggtggcggc
cccccagttggaggtggacgaggtggcgcgcctccggtgaggaggtag

DBGET integrated database retrieval system