Triticum dicoccoides (wild emmer wheat): 119293395
Help
Entry
119293395 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119293395
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119293395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119293395
NCBI-ProteinID:
XP_037427785
LinkDB
All DBs
Position
4B:85960546..85962220
Genome browser
AA seq
394 aa
AA seq
DB search
MSGHKLSLLVALTALVVLTAVEAEYNVVDYGARPDGGADSAGAFLAAWGAACNDTGSSGS
RPVLRVPAGRFLLSRAYFKGPCRSAGVVVAIDVNGTVFAPPTVDSRAWIMFHHADGLAIR
GGTLDGQGQEYWACKKDGRCSGQGPTTLDISQSKGVSVKQLTLLDSKNVHMVIFDSTGVT
VQGVRMVAPANSPNTDGIHAQLSRHVSILNTTISTGDDCVSLGPGSSDVLIRDIKCGPGH
GISIGSMGGQAGEQGVRNVTVERAVLTGTTNGLRIKTWGMPNPGSVTGVSFSQVTMQRVA
NPIVVDQNYCPRSRKVECPGKSSGVQISDVSYEDIEGTSRTPVAVKFDCSDTNPCSGIRL
KNIRLTYRHKRPAQAKCRNAGGSASGEVTPPSCF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccataagctgtcgctactggttgccttgacggcattggtggtgttgacggcg
gtggaggcggagtacaatgtcgtcgactacggcgcgaggcccgacggcggggcggactcg
gctggggcgtttttggccgcgtggggcgcggcgtgcaacgacacggggagctccggctcc
cggccggtgctgcgcgtgccggcgggcaggttcctgctcagccgggcctacttcaagggc
ccatgccggagcgccggcgtggttgtcgccatcgacgtcaatggcaccgttttcgcgccg
ccgaccgtggacagcagggcgtggatcatgttccaccacgccgacggcctggcgatccgc
ggcgggacgttggacgggcaggggcaggagtactgggcgtgcaagaaggacggcaggtgc
agcgggcagggccctacgacgctggacattagtcagtccaagggcgtgagtgtgaagcag
ctgacgctgctcgacagcaagaacgtccacatggtcatcttcgactccaccggcgtgacg
gtccagggcgtcaggatggtcgctccggccaacagccccaacaccgacggcatccacgcc
cagctctcccgccacgtgagcatcctcaacaccacgattagcaccggcgatgactgcgtc
tccctagggcccggctcctccgacgtgctcatcagggacatcaagtgcggcccgggccac
ggcatcagcatcgggagcatgggagggcaggccggcgagcagggggtgaggaacgtgacc
gtggagagggcggtgctgacgggcacgacgaacggcctgcgaatcaagacgtgggggatg
cccaacccaggctccgtcacgggcgtctccttctcgcaggtcacgatgcagcgcgtggcg
aaccccatcgtcgtcgaccagaactactgcccccgcagccgcaaagtcgaatgcccgggc
aagagctcgggggtgcagatcagcgacgtgtcgtacgaggacatcgagggcacgtcgagg
acgcccgtggcggtcaagttcgactgcagcgacaccaacccctgcagcgggatcaggctc
aagaacatcaggctgacgtaccggcacaagcggccggcgcaggccaagtgccggaacgcc
ggcgggtccgcgtccggggaggtcacgccgccgagctgcttctga
DBGET
integrated database retrieval system