Triticum dicoccoides (wild emmer wheat): 119293409
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Entry
119293409 CDS
T07278
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
119293409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdc04040
]
119293409
Ion channels [BR:
tdc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119293409
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
119293409
NCBI-ProteinID:
XP_037427795
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All DBs
Position
4B:complement(96926468..96929771)
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AA seq
722 aa
AA seq
DB search
MAGFLQRHVLPPFRRPPLPFFRHGAGAASSANQPQGRRPWTPSRILDPGDDVVLNWNRLF
LVTCMVGLFVDPMYFYLLYAKTQACVKMNMGIGVAVTAVRTVADLFYLAHMILKFRTAFV
APSSRVFGRGELVRDPDQIAIRYLKNDFIIDLAAMLPIPQIIIWFVIPAVSTTSANHTNN
TLSMIVLIQYIPRVFLIISLNSKIVKSSGVVTRTAWAGAAYNLLLYTLASHVLGALWYLL
SIERQYTCWVDQCTSDNGTDPRVPICDMSYLDCKTLEDPVRMKWHAASNITKQCGLPGAK
FEYGLFEDALKLDIVDASFFEKYLYCLWWGFRNLSSYGQNLQNSTYAGETIFCILICIMG
LVFFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPLELQERVRRFFQYKWLAT
RGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLSTKDAY
IVREGDPVSEMLFIIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMPNPSLNF
PQSTRTVRSVTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGACFVQGA
WRRYKKRKLARELMKQEGLLYDQGDDDGQGGAGAIAGADASTPLLGEYKGGAGAASSSAE
GADGGGTHLGATFLASKFAKNTKKGAHQKSMSQRIDDVSTMKFPKLAKPDEPDFSLHSED
TL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcctccagcgccacgtcctcccgcccttccgccgcccgccgctccccttc
ttccgccacggcgccggcgccgcgtcctccgccaaccagccccagggccgccggccatgg
acgcccagccgcatcctcgaccccggggacgacgtcgtccttaactggaaccgcctcttc
ctcgtcacctgcatggtcggcctcttcgtcgaccccatgtacttctacctcctctacgcc
aagacgcaggcgtgtgtcaagatgaacatgggcatcggcgtcgccgtcaccgccgtgcgc
accgtcgccgacctcttctacctcgcgcacatgatcctcaagttccgcaccgctttcgtc
gcgcccagctcgcgcgtgttcgggcgcggcgagctcgtcagggaccccgaccagatcgcc
atccggtacctcaagaacgacttcatcatcgatctcgccgccatgctcccgattccccag
atcattatctggtttgtgataccagctgtgagcaccacctcagcaaaccacaccaacaac
acgctgtcgatgatcgtgctgatccagtacatacccagagtgttcctcatcatatccctc
aactccaagatcgtcaagtccagtggagtggtcacaagaactgcctgggcaggggctgcc
tacaacctgcttctctacacactcgccagtcatgttctcggcgccctgtggtacctcttg
tccattgagaggcagtacacctgctgggtggaccaatgcacaagcgataatggcactgac
cccagggtgcccatatgtgacatgagctatctggactgcaaaacgcttgaggatcctgtt
cggatgaagtggcacgcggccagcaacatcactaagcagtgcggacttcccggggcgaaa
tttgagtacgggttgttcgaggatgctctgaagctcgatatcgtcgacgcgtccttcttc
gagaagtatctctactgcctctggtggggtttccggaacttgagttcttatggacagaac
ttgcagaacagcacctacgcaggggagactatattctgcatcctcatctgcatcatgggc
cttgttttcttctcacatctcattggaaacatgcagacgtacttgcagtcgatgacggtg
aggctggaggagtggcgggtgaagcggcgcgacatcgaggagtggatgcgtcaccggcag
cttcccctggagctccaggagcgcgtccggaggttcttccagtacaagtggctggccacc
aggggcgtcgacgaggaatccatcctccagtcgctgcccctcgacctccgccgcgagatc
cagcgccacctctgcctcgccctcgtccggcgggtgcctttcttctcgcagatggacgag
cagctgctggacgccatctgcgagcggctggtgtcgtcgctgagcaccaaggacgcgtac
attgtgcgggagggcgaccccgtgagcgagatgctcttcatcatccgtggcgagctggag
agctcgacgacggacggcggccggaccaacttcttcagctccatcacgctccggccgggg
gacttctgcggcgaggagctgctgacgtgggcgctgatgcccaacccgagcctcaacttc
ccgcagtccacgcgcacggtgcggtcggtgacggaggtggaggcgttcgcgctccgggcc
gaggacctcaagtacgtggccaaccagttcaagcgcctccacagcaagcggctgcagcac
gcgttccggtactactcccaccagtggcggagctggggcgcctgcttcgtgcagggcgcc
tggaggcggtacaagaagaggaagctcgccagggagctcatgaagcaggaggggctcctc
tacgaccagggcgacgacgacgggcaaggcggggctggcgccatcgccggcgccgacgcc
agcacgccgctgctcggcgagtacaagggcggcgctggcgcggcgtcgtcgtccgcggag
ggcgccgacggcggcggcacgcacctgggcgccacgttcctggcatccaagttcgccaag
aacaccaagaagggcgcgcaccagaagagcatgtcgcagcggatcgacgacgtgtccacc
atgaagttccccaagctggccaagcccgacgagccggatttctctttgcactccgaggac
acgctgtaa
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