Triticum dicoccoides (wild emmer wheat): 119293505
Help
Entry
119293505 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119293505
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119293505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
119293505
NCBI-ProteinID:
XP_037427864
LinkDB
All DBs
Position
4B:170960408..170964630
Genome browser
AA seq
677 aa
AA seq
DB search
MAAALILLLAAVVGVAPTVAPGPVARGAGVTLHVEHHQVVVDNGVVQVTVSKPQGQITGV
RYAGEHNLLHFTNDENSGGYWDVVWNFPGSGHPRGMIDMLDSTEFRVVSASEGQVELSFR
STYDPSRLNSVRLTVDKRLVMLRGSSGFYCYAVLEHAGSWPALNITEARLAFKLNTARFT
YMAVSDEIQRYMPRAADRDAPRGKPLAYKEAVLLLNPAEPQFKGEVDDKYQYSLDNKDNA
VHGWIAGAPGPAVGFWVVTPSNEFKTGGPFKRELTSHVGPTSLTMFMGTHYVGNDIVAKI
KEGEHWKKVMGPVFIYLNSNHERGDFHALWEDAKAQAEAEASKWPYTFPESPDFHKASQR
GSVTGRLLVRDRFLSGKDMPARRAYVGLAAPGQPGSWATESKGYQFWARASATCGSFAIG
NVRAGVYNLYAWVPGTLGDYMHTAPVRVDAGGAVVLGDLVFEPPRSGPTLWEIGVPDRSA
AEFFVPEPNLKYVNKLFLSKDKYRQYGLWDRYAELYPAGDPVFTVGESHYSKDWFFAHVT
RKTSNGEDAPTTRRIRFGLSRVVADGTYTLRVALAAAHMSRLQLRVNGAPVTRRGSSADA
GVFVTPDFGDGNAIARHGDHGTWWSFEFGIKGYLLMEGENTISITQVRAFSEFMGVMYDY
IRLEGPPGSWRDPTQLP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctctgatcctcctgctcgccgccgtggtgggcgtggccccgacggtggcg
ccggggccggtggcacgcggcgctggcgttacgctgcatgtagagcatcaccaggttgtg
gtggacaacggcgtggtgcaggtaacggtctccaagccgcagggccagatcaccggcgta
cgctacgccggcgagcacaacctcctgcacttcaccaacgacgaaaactctggcgggtac
tgggacgtggtttggaactttccagggtccggtcatccaagaggcatgatcgacatgctg
gacagcacagagttcagggtcgtatcggccagcgaagggcaagtggagctctccttcagg
agcacctacgacccatcacgcctcaacagcgtccggctcaccgtcgacaagaggctggtg
atgctgagaggcagctccgggttctactgctacgccgtcttggagcacgccggcagctgg
ccggccctcaacatcacggaggcccggctcgccttcaagctcaacacggccaggttcacc
tacatggcggtctcggacgagatccagaggtacatgccgcgggcggcggaccgggacgcg
ccccgcggcaagcccctggcgtacaaggaggccgtgctcctcctcaaccccgccgagccg
cagttcaagggcgaggtggacgacaagtaccagtactcgctcgacaacaaggacaacgcg
gttcatggctggatcgccggcgctcccggcccggccgtggggttctgggtcgtcaccccc
agcaacgagttcaagaccggcggcccgttcaagcgcgagctcacctcccacgtcggcccc
acctccctcaccatgtttatgggaacacattacgtcgggaacgacatcgtggccaagatc
aaggagggcgagcactggaagaaggtcatgggcccggtgttcatctacctcaactccaac
cacgagaggggggacttccacgcgctgtgggaggacgccaaggcgcaggccgaggccgag
gccagcaaatggccctacaccttcccggagtcgcctgacttccacaaggccagccagagg
ggctcggtcaccggccgattgctggtcagggacaggttcctgagcggcaaggacatgccc
gcccgccgtgcctacgtcggcctcgccgcgccggggcagcctggctcctgggcgacagag
agcaagggctaccagttctgggcgagggcgtcggcgacctgcggcagcttcgccatcggc
aacgtccgggcaggggtgtacaacctctacgcctgggtgcccgggaccctcggcgactat
atgcacacggctcccgtgagagtggatgccggcggcgccgttgtcctcggcgatctcgtg
ttcgagccgccgcgatcggggccgacgctgtgggagatcggcgtgcctgaccggagcgcc
gccgagttcttcgttcctgagcccaacctcaagtacgtcaacaagctcttcctcagcaag
gacaagtacaggcagtacgggctctgggacaggtacgctgagctgtaccccgccggcgac
cccgtcttcaccgtcggcgagagccactactccaaggactggttcttcgcgcacgtcacg
aggaagacgagcaacggcgaagacgcgccgacgacgcgacgtatccggttcggcctgtcg
cgcgtcgtcgccgacggcacctacacgctgcgagtggcgctcgccgcggcccacatgtcg
aggctgcagctgcgggtgaacggggcgccggtgacgaggaggggatcgtcggccgacgct
ggagtgttcgtgacgccggacttcggcgacggcaacgcgatcgcgaggcacggcgatcac
ggcacgtggtggagcttcgagttcgggatcaaagggtacctgctcatggaaggggagaac
accatcagcatcacgcaggtcagggccttcagcgagttcatgggggtcatgtacgactac
atccggctggaagggcctcccggttcttggcgagatcccacacaacttccgtga
DBGET
integrated database retrieval system
