Triticum dicoccoides (wild emmer wheat): 119293808
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Entry
119293808 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119293808
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119293808
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119293808
NCBI-ProteinID:
XP_037428058
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Position
4B:complement(516150459..516152883)
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AA seq
433 aa
AA seq
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MGPRKFLLASITTVSVLVYMFPHANSESVALPPESTYGPAAESPDAGAPELSPGPPPMVF
DVDDYGASAGGDATEAFLAAWKDACNSSSDPSLFLVPEGKTYLLMPLSFGGPCRSTTITA
MIRGTLEAPSNRSVWLDGDRRERWITFEDVDGLHVMGGGTLNGHGQEWWINSCKVNKSMK
CVPGPTALYFRTCNHLVVDDLEVKDSMQMHVVIANCWKAAVSRLFVTAPGWSPNTDGIHV
SNSTEVSITNCIISTGDDCISIVSGSEFVRASGIYCGPGHGISIGSLGANKSRAHVSDVL
VEKATLVGTTNGVRIKTWQGGEGAAERITFQDIKMYNVTNPIIIDQNYCDSKKPCSEEDS
AVAISDIRYNNIHGTSLSKVAVKFICSNAVHCDGIVMEDVSLVGQKGAYLKCSSVNARVI
TPGFNYPYCTADM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaggaagtttctcttggcctccattactaccgtatcagttcttgtttacatg
tttccgcacgccaattcggagtccgtagccctccctcccgaatcgacctatggcccagcc
gcagagagtccagacgcgggcgcgccggagctcagcccggggccgccgccgatggtattt
gacgtcgacgactacggcgcgtcggccggcggcgacgccaccgaggcgtttctcgcggca
tggaaggacgcctgcaactcctcctccgacccgtccctgttcctcgtgcccgaggggaag
acctacctcctcatgcccctcagcttcggcggcccctgcaggtctaccacgatcacagca
atgatcaggggaacactggaggcgccgtcgaaccggtcggtgtggctcgacggcgatcgc
cgggagcggtggatcacgttcgaggacgtcgacggcctgcacgtcatgggcggcgggacg
ctcaacgggcacgggcaggagtggtggatcaactcgtgcaaggtcaacaaatccatgaaa
tgcgtccccggcccgacggccctgtacttcagaacctgcaaccatctggtggtggacgac
ctggaggtgaaggacagcatgcagatgcacgtcgtgatcgcaaactgctggaaagcagcc
gtctcgcggctgttcgtcaccgcgccggggtggagccccaacaccgacgggatccacgta
tccaacagcacagaggtgtccataaccaactgcatcatcagcacaggcgatgactgcata
tccattgtgtctgggtctgagtttgtgcgggcatcaggcatatattgtggaccgggccat
ggaataagcattggcagcctaggagcgaacaaatcgcgggcccatgtctctgacgtgctg
gtggagaaggccacgctggtgggcacaaccaacggtgtgcggatcaaaacatggcaggga
ggagaaggggctgcagagaggattactttccaagacataaagatgtacaatgtcactaac
cctataatcattgaccagaactactgtgactccaagaaaccatgctccgaagaggactca
gctgttgccataagtgacatacgctacaacaacatacatggaaccagtttatccaaagtt
gcggtgaaattcatttgcagcaacgctgtccattgcgatggcatagtgatggaagatgtt
tccttggtcgggcaaaaaggggcctaccttaaatgttcctccgtgaacgccagggttata
acaccaggattcaactacccttattgcaccgcggacatgtag
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