Triticum dicoccoides (wild emmer wheat): 119294367
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Entry
119294367 CDS
T07278
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119294367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119294367
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119294367
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119294367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
119294367
NCBI-ProteinID:
XP_037428463
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Position
4B:complement(64521641..64522441)
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AA seq
266 aa
AA seq
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MSPVWPSSAVPVRSVWASNFKHESANLRHVASRAQYVAVNVHYPGVVHHPSQDHNALTVE
ERYALVKANVDDLKPLQVGIALYDSDGGYLDAWEFNLRDFRPQADPHDENSLAYLAGRGL
DVGALRDHGVSADMLDKKLFESGLVGARRGRSRSWITYAGAYHVAYLLKIVTGGAPLPRD
VAGFNGAVRRYIGDQVYDVATMAAGCPAMPLGLEQIADYLGFHPPLGSPRLAAAAGVRAL
QVFMRLKYVELGGDVRKYRGLLKGLH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggtatggccgtcgtccgcggtcccggtgcgttccgtgtgggcgtccaacttc
aagcatgaatcggccaacctccgccacgtcgccagcagagcccagtacgtcgccgtcaac
gtgcactacccgggcgtcgtccaccaccccagccaggaccacaacgccctcaccgtggag
gagcgctacgccctcgtgaaggccaacgttgacgaccttaagccgctgcaggtcggcatc
gcgctctacgacagcgacggcgggtacctcgacgcctgggagttcaacctccgcgacttc
cgcccccaggccgacccgcacgacgagaactccctcgcgtacctcgccggccgcggcctc
gacgtcggcgcgctccgcgaccacggcgtcagcgccgacatgctagacaagaagctgttt
gaatccggcctggtcggcgctcggcgtgggcggtcgcggagttggatcacgtacgctggg
gcctaccatgtcgcatacctgctcaaaatcgtcaccggcggcgccccgctgccgcgagac
gtggccgggttcaacggcgccgtgcggcgttacatcggcgaccaggtctatgatgtggcc
acgatggcggccggctgcccggccatgccactggggttggagcagatcgccgattacctc
ggcttccatccgccgctggggagccctcgcctcgcagctgccgccggcgtgcgcgcgctg
caggtcttcatgcggctgaagtacgtagagctcggcggcgacgtgcgaaaataccggggt
cttcttaaaggcctgcactag
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