Triticum dicoccoides (wild emmer wheat): 119294683
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Entry
119294683 CDS
T07278
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119294683
Transcription machinery [BR:
tdc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
119294683
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
119294683
NCBI-ProteinID:
XP_037428821
LinkDB
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Position
1A:599307498..599310391
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AA seq
570 aa
AA seq
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MGLPMARGPCCCSPSSSSSSSSPWMLQAQLPKNPHPPLSGRSVCSESLRVLALHLLLNRR
ANLSRRRGDITRTAASSSGLLQITGNMSGSSPKIKVDAERTSLDGALDRNAQFDMIYEDM
SSWMNGAHTSGNSLQYNLLMQNIHVLQSSLAAQDLVLLERDILVHIEQLGALKWFNASRS
GATITHTSHAPDFALPWNDTEFAPVTPLDEQSDDQLVIIRSGKSQERKLKRIRASEKVSV
VCVKASSRKPRKSRRSTSSQFISEWKNYPGRQRSIVREQSDLLVTIKECANLEKIRENMV
KEGQEVCYDKWAKAAGVDEAVLKSRLQAGYCCRERLLVTTEWLVKYIARTYTGMGTAFED
LLQAGKMGVLDGAERFDSQRGCKFSTYVKYWIRKPMLALLAENSGVIQLPARMDCIIRKV
REAKRAIRSSTGRNPIDAEIATFVGASVANVRLARKCSRRVVSLYMEVGAGQNAKFMDVT
PDTSLEDPEEAIFRRQLRERLLMVLDRLPAREGRVLKLRHGLEDGRCRSLEQIGGIYHVS
KEWIRKIEKSAMSKLRNEDVHGELKDFCGF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcccatggcgcgcggcccgtgctgctgctcgccgtcatcgtcgtcctcctcc
tcctcgccgtggatgctgcaggcccagctccccaagaacccccaccctccactgagtggg
aggtcagtttgctctgaatcgttgagagttctggccctgcatctcttgctcaatcggcgc
gctaatcttagccggcgccggggtgacatcaccagaactgctgcatcttcatccggtttg
cttcagataacagggaacatgtcaggcagctcaccaaaaataaaggtggatgccgaaaga
acatcccttgatggtgctcttgacaggaatgcgcagttcgacatgatctacgaggacatg
tcttcttggatgaatggggcacacacaagtggcaacagtttgcagtataacttgttgatg
caaaacatccatgtgttacagagtagtttggctgctcaagatttggtgttgctggagaga
gatatccttgtacatattgaacagcttggagctctgaaatggtttaacgcgtcgaggtcc
ggtgccaccataacacatacctcacatgcaccagattttgcactcccttggaatgatact
gaatttgctccggtgactcctctcgatgagcaaagcgatgatcaattggtgattattcga
agtgggaaaagccaagagaggaaattgaagagaattagagcatcagaaaaggtctctgtg
gtttgtgtaaaagcatcctcacgaaaaccaagaaaatcacgcaggtccaccagtagtcaa
tttatatctgagtggaaaaactatccaggccggcaaaggagcatagttcgggaacagtcg
gacttgctggtgactatcaaggaatgtgcaaaccttgagaagatcagggagaacatggtg
aaggaagggcaggaggtctgctatgataagtgggccaaagcagctggagttgatgaagcg
gtcctgaagagtagattgcaagcaggctactgctgcagagagaggttactggtgaccacc
gagtggcttgtcaagtacattgcaaggacatacaccggaatgggaacagctttcgaggat
ctactccaggctgggaaaatgggtgtccttgatggcgctgagaggttcgacagccagaga
ggatgcaaattctcaacctatgtgaagtactggataaggaaacccatgctagcgctcctt
gctgaaaattctggagtgatccagctccccgcaaggatggattgtatcatccgaaaggtc
agggaagctaagcgggcaattcgatccagcactgggaggaatccaatagacgcggagatc
gcgaccttcgttggcgcgtcggttgccaatgttagattggcgcggaagtgctcccgtcgt
gtcgtttcactctacatggaggtcggggccggacagaacgccaagttcatggacgtgacc
ccagacacatcactagaagatccagaggaggccatcttccggaggcagctgagggagagg
ctgctcatggttctggacaggctcccggcgagagaagggcgtgtgctgaagctgcggcac
ggcctcgaggatggcaggtgccggtccctggagcagatcggaggcatttaccacgtgtcc
aaggagtggatcaggaagattgagaagtcggccatgtccaagctcaggaacgaggacgtg
catggtgagctcaaggacttctgcggattctag
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