Triticum dicoccoides (wild emmer wheat): 119294858
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Entry
119294858 CDS
T07278
Name
(RefSeq) phytochrome A type 3-like
KO
K12120
phytochrome A
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119294858
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
PAS_8
PAS_10
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
119294858
NCBI-ProteinID:
XP_037429033
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Position
4B:complement(39535473..39542981)
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AA seq
1130 aa
AA seq
DB search
MSSSMPASSSSSRNRRSTQERVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQ
EGRSEKVIAYLQHIQRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDP
PRLDIGTNVRSLFTDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVV
DFEPVNPTEFPASAAGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVM
AYKFHEDNHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKV
IEDEALPFDISLCGSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQ
QKKKILWGLVVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTI
LSDMLFKEASPLTIVSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEV
HMDSTGLSTESLHDAGYPGASALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKND
PSDQDDSRRMHPRLSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKAS
LDEQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDD
AIGRHILTLVEESSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASR
DLHDDVVGVCFVAQDVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWN
AAMTKLTGWHREEVLNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPF
GFFDRSGKYTDCLLSVNRRENEGGLITGVFCFIHIPSHELQQALQVQQASEQTSLKRLKA
FSYMRHAINNPLSGMLYSRKALKDTDLNEEQMRQIHVSDNCQHQLNKILADLDQDNIMEK
SSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILS
DFLSISVKFSPVGGSIEISAKATKNSIGENLHLIDLELGIKHQGLGVPAELMAQMFEEDD
AGQSEEGLGLLVSRNLLRLMNGDVRHLREAGVSVFILTAELACAPTATGQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaatgcctgcctccagttcttccagcaggaaccgccggagcacccaggaa
agggtgttagcacaaacaacccttgatgctcaactcaatgctgagtttgaagaatctagt
gactccttcgactactccaagctggtcgaagcccagcgggacactccaaccgtgctgcag
gaagggcggtcggagaaagtcatagcctacttgcagcacattcagagagggaagatgatc
cagtcgtttggttgcttgttggcccttgatgagaagagcttcaatgtcatcgcgttcagc
gaaaacgcgccagaaatgcttacaactgtcagccatgcagtgcccagtgtcgacgatccc
ccaaggctcgacatcggcaccaatgtacggtctctgttcactgaccagggtgccacggct
ctgcacaaggcactagggtttgctgatgtttctttgctgaatcctatcctggttcagtgc
aagacctcaggcaagcctttctatgccattgttcaccgagcaaccggctgtttggtggta
gactttgagcctgtaaaccccacagaatttcctgcctctgctgctggggccttgcagtct
tacaagcttgctgccaaggcaatctccaagatccaggcactgccaggtggaagcatagag
ctgctatgcaatactgtggtcaaggaagtctttgaacttacagggtatgatagggttatg
gcttacaagttccatgaagataaccatggcgaggtctttgccgagatcacaaagcctggc
cttgagccttatctgggcctgcactatccagccactgatattcctcaagcggccaggttc
cttttcatgaagaacaaagtgcggatgatttgcgatgtccgctcaagatccataaaggtc
atcgaagatgaggcactcccctttgatattagcttgtgtggttcagcgctcagggcagca
cacagctgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatggct
gttgtggttaatgagaatgaagaggatgacgaggtcgggtctgaacagccagcacagcag
cagaagaagaagatactgtggggccttgttgtttgccaccatgagagccccagatatgtc
ccttttccgctgcgctatgcttgtgagttcttagcacaggtgtttgctgtccatgtcaac
aaggagtttgaagtgcagaaacaattacgcgaaaaaagcatactgaggacgcaaacaatt
ctctctgacatgctgttcaaggaagcctcccccctgactatcgtatcaggggcacccaat
atcatggacctaatcaaatgtgacggtgctgctcttctgtatggggacaaagtatggcgt
ctgggcaatgctccaaccgagtctcagatacgtgatcttgccttgtggctgtcggaagtt
cacatggactccactggcctgagtactgagagcctccatgatgctggctacccaggagcc
tctgctcttggtgattcggtttgtgggatggcagtggctaagatcaattccagtgatatt
cttttttggttcaggtcacatacagctcaagaaatcagatggggaggtgcaaagaatgac
ccatcggaccaggatgacagcagaaggatgcaccccaggttgtctttcaaggcattcctt
gaagttgtcaagatgaagagcttggcttggactgattctgagatggatgctattcattca
ttgcaacttatacttcgagggacggtggatggtgtcgtcaagccaaccggaaaagctagc
ttagatgaacagattggtgatctaaagcttgatgggcttgctgaattgcaggcagtgacc
agtgaaatggttcgtctaatggaaacagcaactgttccaatcttggcggtagatggcaat
ggattggtcaacgggtggaaccagaaagcggcagaattgactgggctaagggttgatgat
gccataggaaggcacatacttacccttgtggaggaatcttctgtatcagttgtccagagg
atgctatatctagctttgcagggcaaagaagagaaagaagttcgatttgaggtaaagact
catggcccaaagagagatgatggccctgttatcttggttgtgaatgcttgtgccagccgg
gaccttcatgatgatgttgttggggtgtgctttgtagcccaagatgtgactgtccataag
ttggtgatggacaagtttactcgggtagagggagactacatggcgatcattcacaacccg
aacccactcattcctcctatatttggtgctgatgaatttggatggtgttgtgagtggaat
gctgcaatgaccaagctgactgggtggcacagagaggaagtgctcaataagatgcttctc
ggtgaagtgttcgacagtagcaatgcctcctgccttttgaagaacaaagatgcatttgta
agcctttgtgttgttatcaacagcgcgttagccggcgaagaaacggaaaaggctccattt
ggcttcttcgaccgaagcgggaagtacactgattgccttctgtcagtgaacagaagggaa
aatgagggtggtctcatcactggggtattctgttttattcatattcctagtcatgagctg
caacaagcactgcaggtgcagcaagcctcggagcagacgtcgctaaaaaggctgaaagct
ttctcctacatgagacatgcaatcaacaaccctctctcaggcatgctttactccagaaaa
gcactaaaggacacagatttgaatgaagaacagatgaggcagatccatgtctcagataat
tgtcagcaccagctaaacaagatacttgccgacttggatcaagataacatcatggaaaaa
tctagttgcttggatttggagatggctgaatttgtgttgcaagatgtggtggtggctgct
gtaagccaagtactgattgcctgccagggaaaaggcatcagagtctcttgcaacctgcca
gagagatttatgaagcaactagtgtatggagatggcgttcgactccagcagatcctttcc
gacttcctatctatttcagtgaagttctctcctgttggaggttctatcgagatttcagcc
aaggcgacgaagaacagcatcggagagaatcttcaccttattgaccttgaacttgggatc
aagcaccagggactaggagtcccggcagagctaatggcgcaaatgtttgaggaggacgac
gcggggcagtcagaggaggggttgggcctcctggtctctagaaacctgttgaggctcatg
aatggcgatgttcgtcacctaagggaagctggtgtgtcagtcttcatcctcaccgccgag
cttgcttgcgctccaacggcaacggggcagtga
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