KEGG   Triticum dicoccoides (wild emmer wheat): 119295077
Entry
119295077         CDS       T07278                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119295077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119295077
   03036 Chromosome and associated proteins [BR:tdc03036]
    119295077
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     119295077
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     119295077
    COMPASS/SET1 complex (yeast)
     119295077
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SCAP WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 BBS2_Mid
Other DBs
NCBI-GeneID: 119295077
NCBI-ProteinID: XP_037429301
LinkDB
Position
4B:70670728..70675188
AA seq 331 aa
MPAGEKEERVTMEVTDEMLKTMEVGLAFRDYIGRISSMDFHSKATNYLVTASDDESIRLY
DIQNAVCLKTINSKKYGVELVCFTTNPTLVLYSSKNGWDESLRLLSLNDNRFVRYFKGHL
DRVVAMSLCYEKDSFLSGSLDRTVLLWDLRADKAQGLLRVQGRPAVSYDDQGLVFAVAYG
GYVRMFDARKFEKGPFDIFSVGNDESEANMIKFSSDGRRLLLTTKAGCIHVLDSFHGNSL
ATYNVKPVVTNSTLEASFSPDGNHIISGSGDGSVFAWSVRSGKKVARWGSTDSEPPLVRW
APGSLMFLTGSSELSCWVPDLSKLGSFAVTK
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccagccggggagaaggaggagagggtgaccatggaggtcaccgacgagatgctcaag
accatggaggtcggcttggccttccgggactatattggcagaattagttctatggatttc
cacagcaaggctacaaactatcttgtgacagccagtgatgatgaatcaatacgcctatat
gacattcaaaatgctgtatgtttgaagaccattaatagcaaaaagtatggggttgaactg
gtgtgcttcactactaacccaactcttgtcttgtattcctcgaaaaatggttgggatgaa
tctctgcgtctgctctctctaaatgataaccggtttgtaagatattttaaaggccatctt
gacagggttgttgctatgtcattatgttacgagaaagacagttttctttctggttcactt
gatcgaactgttctcctatgggatctgagggctgacaaagcacagggcttgctgcgtgtg
caagggaggcccgcagtttcatatgatgatcagggtttagttttcgcagttgcttatggt
ggttatgtaaggatgtttgatgctcgaaaatttgagaaggggccttttgatattttctcc
gttggtaatgatgaatcagaagccaatatgataaagttcagcagtgatggaaggcggctt
cttttaaccaccaaagcagggtgtattcatgtgctagattcatttcatggcaacagtctc
gcaacttacaatgttaagccagttgtaaccaattcgacattggaggcatcattcagccct
gatggaaatcatatcatatctggctctggtgatggtagtgtttttgcttggagcgttaga
agtggaaagaaggttgcgcgctgggggagcacagatagtgagccaccattggttaggtgg
gctccaggatcgttgatgttcttgactggatcttcagaactatcctgctgggtcccggac
ctatcgaagctgggatcatttgccgttaccaagtaa

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