Triticum dicoccoides (wild emmer wheat): 119295084
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Entry
119295084 CDS
T07278
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119295084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119295084
03009 Ribosome biogenesis [BR:
tdc03009
]
119295084
04131 Membrane trafficking [BR:
tdc04131
]
119295084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119295084
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119295084
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119295084
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119295084
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119295084
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119295084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
CDC48_2
AAA_22
AAA_14
TIP49
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
IstB_IS21
AAA_18
ATPase_2
AAA_7
ABC_tran
ResIII
AAA_24
AAA_lid_PRS2_C
NACHT
NB-ARC
TsaE
Viral_helicase1
DUF815
Vps4_C
Sigma54_activat
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
119295084
NCBI-ProteinID:
XP_037429336
LinkDB
All DBs
Position
1A:404813119..404815521
Genome browser
AA seq
800 aa
AA seq
DB search
MASQGDASGKKDYSTAILERKKSPNRLVVDEATNDENSTVALHPDTMDSLELFHGDIVLL
KGKKRKDTVCILLPDDTCDKTKVRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHVLPV
DDTVQGIAGNLFDAFLRPYFLEAYRPLRKGDLFLVRGGMTSVEFKVVETDPAEYCIVASD
TEIFCDGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKCIGVKPPKG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPAI
IFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRF
GRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHVSRDTHGYVGADLAALCTEAAL
QCIREKMDVIDLEDDTIDAEILNSMAVTNDHFKIALGTSNPSALRETVVEVPNVSWEDVG
GLEGVKRELQETVQYPVEYPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRV
LNQLLAEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVESRLQIFRAC
LRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDMEKERRLKENPEAM
EEDEVDEIKAAHFEESMRYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQPAAGTT
SATDPFASSTTAAEEDDLYS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagggcgacgcgagcgggaagaaggactactccacggcgatcctggagagg
aagaagtcgccgaaccggctggtggtcgacgaggcgaccaacgacgagaactccaccgtc
gccctgcacccggacaccatggacagcctcgagctcttccacggcgacatcgtcctgctc
aagggcaagaagcggaaggacacggtctgcattctgctcccagacgacacgtgcgacaag
accaaggtccggatgaacaaggtcgtcaggaagaacctgagggtccggctcggcgacgtc
gtctccgtccatcagtgcccggacgtcaagtacgggaagcgcgtgcacgtactccccgtc
gacgacaccgtccaagggatcgccggaaacctgttcgacgccttcctgagaccctacttc
ctcgaggcctatcgtcccctcaggaaaggggacctattcctggtgaggggcggcatgacg
agcgtggagttcaaggttgtggagaccgaccctgccgagtactgcatcgtcgcctctgac
acggagatattctgtgacggcgagcctgtcaagcgggaggatgaggagaggctcgacgag
gtcggctacgacgatgtcggcggagtcaggaagcagatggcccagatcagggagctggtc
gagctcccactgcgccaccctcagctgttcaaatgcatcggtgtgaagcctccaaagggc
atcttgctgtatgggccacctgggaccggcaagaccctcattgccagagcggtggctaat
gaaacaggtgccttcttcttcctgatcaatggtccggagatcatgtcgaagatggccgga
gagagcgagagcaacctcaggaaggcgtttgaagaggccgagaagaatgcgccggccatc
atcttcatcgatgagattgattccatagcaccaaagagagacaagaccaacggagaagtc
gaaaggcggatcgtctcgcagctgctcactctcatggacgggctcaagtcccgcgcacat
gttattgtcatgggtgctaccaaccgcccgaacagcatcgaccctgctctcagaaggttt
gggaggtttgaccgggagatcgacattggagtccccgatgaagttgggcggcttgaggtt
ctccggattcacaccaaaaacatgaagctagctgaagatgttgagctggagcatgtctcg
agggacactcatgggtatgtcggcgctgatctcgccgccctatgtaccgaggctgctctt
cagtgcattcgcgagaagatggatgttatcgacctcgaggatgacaccattgatgctgag
atactgaattctatggctgtcaccaacgaccacttcaagattgcactggggacaagcaac
ccttccgcccttcgtgaaactgtcgtggaagttccaaatgtctcttgggaagatgttggc
ggtctggagggtgtcaaaagggagctgcaggagaccgtccagtatccggtggagtaccca
gagaagtttgagaagtttggcatgtctccctccaaaggtgttctgttctatggccctccg
ggctgcggcaagaccttgttggccaaggcgattgctaatgagtgccaggctaacttcatc
agcatcaaaggaccggagctgcttaccatgtggtttggcgagagcgaggccaatgtgcgt
gagattttcgataaggcaaggcagtcggcaccatgtgtcctctttttcgatgagctcgac
tcgattgccacccagagaggaaacagtgtcggtgacgccggaggtgccgctgatagggtg
ctgaatcagcttcttgccgagatggacggaatgaatgccaagaaaaccgtgttcatcatc
ggtgccaccaacaggccagacatcatagatcctgccttgctgaggccggggcgccttgat
cagcttatctacattcctctgcctgacgttgaatccaggctccagatcttcagggcctgc
ctcaggaagtctcctgtggccaaggacgtcgacctgaatgcactcgctaaatacacgcaa
gggttcagcggcgcagacatcacggaaatctgccagcgtgcgtgcaaatacgccatcaga
gagaacattgagaaggacatggaaaaggagaggcggctgaaggaaaaccctgaagccatg
gaggaagacgaggtggacgagatcaaggctgctcacttcgaggagagcatgaggtatgca
cgccggagtgtgagcgatgctgatattcgcaaataccaggcctttgctcagacgctgcag
cagtcccgtggttttggcaccgagttccggttcgctgatcagccggcggcaggaactacc
tctgcgacagatcctttcgcatcctctaccacagcagctgaagaagatgatctgtatagt
taa
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