Triticum dicoccoides (wild emmer wheat): 119295246
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Entry
119295246 CDS
T07278
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119295246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119295246
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119295246
U7-dependent histone pre-mRNA processing factors
119295246
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
partial_CstF
RRM_10
Motif
Other DBs
NCBI-GeneID:
119295246
NCBI-ProteinID:
XP_037429511
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All DBs
Position
4B:96623556..96629040
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AA seq
490 aa
AA seq
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MAAAPAGPQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYK
DEETALSARRNLQGHDVNGRQLRVDFAENGRNTDRNREKGRGGPGMSSTVDAQKQLTTTP
AVGDTSLHQLIGLPPAIHAASVMAGVLGGAQTANVQNGLPVQFGLGNDPLTHYLARMSRH
QLNQIMSELKTLTTQNNDLAKKLLQGIPQLPKALFQAQIMLGLVTPQMMQMAKSQQPSSS
LAQSSHLNESFPQPDAVLPIVHRPPPNPNAMQEQTAPLHNFPQYQHSSQPPVKMFPHGHQ
PGVLAHPPMLSQPFGTSSSVPTQPLVNSGGLTSQVQPSFLTQHPRPPVMPTNVQQLPLTN
PHLSQVAAEPEILPNEIRLPDRASHQAELDHPSKLRKLEDGTSTPGIVNNSPAVYSAPSQ
VVVPSGPSGSYSSGAVHFQQPENEAPQLTQDDESALLQQVLQLTPEQLSSLPVEQQQQVI
QLQKMLSAGK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcccccgcgggcccccagaaccgctgcgtcttcgttgggaacattccgtac
gatgcgacggaggagcagcttgtgcagatatgcgaggaagtcgggcccgtggtctccttc
agactggttgttgataaggaaaccggaaagccgaaaggttatggattttgtgaatacaag
gatgaagagacagctctaagtgcacgccggaaccttcagggtcatgatgttaatggtcgt
cagttacgtgttgattttgctgaaaatgggaggaacactgacagaaatagagaaaagggt
cgtggaggaccaggaatgtcatctactgttgatgctcagaaacaattaaccacaactccc
gctgtaggggacaccagccttcatcagcttattggtcttccaccggcaatacatgctgca
tctgtgatggctggcgttcttgggggagctcaaactgcaaatgtacaaaatggtttacct
gtccaatttgggcttggaaacgaccctcttacccattacttggccaggatgtcaaggcat
cagttgaatcaaatcatgtctgagttgaagaccctaactactcaaaataacgaccttgcc
aaaaaactgctgcaaggaattccacagcttccaaaggccctatttcaggcacagataatg
ctcgggctggtgacacctcagatgatgcagatggctaagagccaacagccctctagctcg
ttggcacaatcttctcacctcaatgaatcatttccgcagccagatgctgtgctaccaatt
gttcatagacctccaccaaaccctaatgccatgcaggaacaaactgcaccgctgcataac
tttcctcagtatcagcattcatctcagcctccagtcaaaatgtttccgcatggacatcag
cctggggtgctggcacaccctccaatgctatctcagcccttcggcacctcttccagtgtt
cctactcaaccccttgtaaactcaggaggcttgacatcacaagttcagccttcatttttg
acacagcaccctagaccaccagttatgccaactaatgtacagcaactacccttgaccaat
cctcatctctcccaggttgctgctgaacctgagatactccccaatgagataagattgcct
gatcgagctagtcatcaggcagagttagaccatccctcgaaattgagaaaattggaggat
ggaacatcaacgccaggaattgtaaacaatagtcctgctgtttattctgctccatcgcag
gtagtggtccctagtggaccatcagggagctatagttctggtgctgttcacttccagcaa
ccagagaatgaagcgcctcagctcacacaggacgatgagtcagcccttctgcagcaagtc
ttacaactgacacctgagcagctgagttcattgccagtggagcagcagcagcaggtgata
cagcttcagaagatgctatcagctggtaaatag
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