KEGG   Triticum dicoccoides (wild emmer wheat): 119295751
Entry
119295751         CDS       T07278                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119295751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119295751
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119295751
 Complex B
    119295751
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_7 RRM_occluded DUF8489 DUF4154
Other DBs
NCBI-GeneID: 119295751
NCBI-ProteinID: XP_037430100
LinkDB
Position
4B:complement(194524058..194530355)
AA seq 548 aa
MADDNGGGGDDYVSEAVRPEGDTHTREEGLSKSRDRDREKDKDKERHRDRDRDRGRDRDR
GRDRDLDKDRDRDKDRDRHQRHHRDKREHRDRPDDHDRHRSRDSERRRDRERDGHRRHRS
RSRSRSRGRDDHRSRSHSKSKRVSGFDLGPTAQSVLPQFPTIPTPSQLPGSSIPGMFPNM
LPFAVGQFNPLVMQPQAMTQQHIFPQATRHARRVYVGGLPPSANEQSVAIYFNQVMAAIG
GNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSL
AAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG
FDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQE
NILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGN
LVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFA
DEDYDAAA
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggccgacgacaacggcggcggcggcgacgactacgtcagcgaggccgtccgccccgag
ggtgatacacatacgcgtgaagagggattgtcaaaatccagggatcgagacagagaaaaa
gacaaggataaggagcgccatagggaccgtgacagagatagaggaagagacagagatcgg
ggtcgggacagggatctagacaaggatcgggacagggacaaggatcgggatcgtcaccaa
aggcatcaccgtgacaaaagggagcaccgagaccgtcctgatgatcacgatcgtcacaga
agccgtgattctgaaaggagaagggaccgcgagagagatggacatcgcaggcatcgctct
cgttcacggtctcgttcaaggggcagggatgatcacagatctcgatctcattcaaaaagc
aagcgagtcagtggattcgacctgggaccaacagcacaatccgtacttcctcagttccct
accattccaaccccaagtcagttaccgggctcttctattcctggaatgttcccgaacatg
ctcccttttgctgttggacagttcaatcccctcgtcatgcagccacaagccatgactcaa
cagcatatttttcctcaggctactcggcatgctcggcgtgtttatgtcggtggccttccc
ccatctgctaatgaacagtctgttgcaatatactttaatcaagtcatggctgctattgga
ggaaacactgctggtccaggtgatgctgttcttaatgtgtacataaaccatgacaagaaa
ttcgcttttgtggagatgaggtctgtggaggaagcaagcaatgcaatggcactggatggc
attttatttgaaggtgcaccagtgaaggttagaagaccaacagactataacccttctctg
gcagctgccctgggcccaagccagccaagctccaatttgaatcttgctgcggttggccta
acaccaggttcagccggagggttagaaggcccggaccgtatttttgtgggtggtctcccc
tattacttcacagaggctcaagttcgggagctgcttgaatcatttgggcctcttcgagga
tttgatcttgtgaaagatagggaaactggtaactcaaagggctatgcgttctgtgtctac
caggacctcaatgtcactgacatagcctgcgctgctctaaatggtatcaagatgggagac
aaaactcttacggtcagacgagcaaaccagggctcagcccaacctagaccagagcaggaa
aatatcctgttgcaggcacagcagcaggtgcagttacagaaacttgtgtatcaagttgga
gcgctccctacaaaggttgtatgcctgacccaggtagttactgctgatgaattaaaagat
gatgaagaatatgaggacattatggaggacatgaggttggaagctgggaaatatggtaac
ttggtgaaagttgtcatcccgcgccctcatccgagtggagagccagtttctggagttgga
aaggtgttcttagagtatgcagatgttgatggttccaccaaagcaaagacggcgatgcac
ggaaggaaattcggtggaaacccagttgttgcggtcttctaccccgagaacaagtttgct
gatgaggactatgacgcggcagcataa

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