Triticum dicoccoides (wild emmer wheat): 119295932
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Entry
119295932 CDS
T07278
Name
(RefSeq) RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119295932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119295932
Spliceosome [BR:
tdc03041
]
Complex B
Other components
Prp19-related factors
119295932
Complex C
119295932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
UvrD_C_2
AAA_22
ResIII
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
119295932
NCBI-ProteinID:
XP_037430252
LinkDB
All DBs
Position
4B:258268305..258281007
Genome browser
AA seq
1568 aa
AA seq
DB search
MPKVYGTGVFEFRHPRAAEYPLPAEVSTSAAPDRTPASTGVSITLLDIQRDRLTRAAAEH
WGSPAAAAAFDADLVREIYATELRVEGRGRKTVPLHRVMILEVSQYLENYLWPHFDPDDA
SFEHVMSMILMVNXQFRENVAAWTSFHGRKDAFKGFLWRVLKLKEEDRDVSMAEKTNYLL
FMINAFQSLEDEIVRETILQAVSLKLWHTLSFGRLQMELCLNPELIKKWTKIKRKEAKEG
KKAGKTGNSSEMLENKFLRNLMEEFLEILDSKVILSSQDGGEESVFNESLSGQVDDSSVL
YCERFMEFLIDMLSQLPTRRFLRPLIADVAVVAKCHLSMLYAHEKGRLFAQLVDLLQFYE
GFEINDHSGTQLSDDDVLQAHYSRFQAFQLLAFKQVPKLRDLALCNIGSIHKRADLTKKL
LVLSDMELQDLVCNKLKIISEKDPWTGRRDFLIEVLVAFFEKRQSQKDAVNALPLYPNEQ
IMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPH
LHAYINNEGDTSFRGWSRMAVPIKEFRITQVKQPNIGEVKPSAVTADVTFSISSYRSQIK
SEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQHVRGCEVIEIRDEEGGLMN
DYTGRVKKDEWKPPKGEIRTVKIALDTAQYHIDASELAEKGAENVYGTFNILMRRKPKEN
NFKAILESIRDLMNETCVVPEWLHNIFLGYGNPSAAQWINMPDLLETIDFKDTFLDASHV
VQSFPAFQVTFINTDGTENMHPSPPFRIKLSKKMREISHALPGNVNASDTASKNNMVDDE
GSQKEKLKVETYIPADPVPYPQDKPNQNSVRFTPTQVGAIISGIQPGLTMVVGPPGTGKT
DTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQKDVPARYLLRLGQGEQELATDL
DFSRQGRVNAMLVRRLELLGEVAKLARSLHLPEDVSYTCENAAYFWLLHVYARWEQFLAA
CVPNKENPSFVKDRFPFSEFFSDTQQPVFTGESFEKDMDAAKGCFKHLSTIFQELEECRA
FELLKSTAERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETF
IPTLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGVPYIEL
NAQGRARPSIAQLYNWRYRELGDLPYVHEEAIFHKANSGFSYEYQLVDVPDYRGRGESAP
SPWFYQNEGEAEYIVSVYIYMRLIGYPANKISILTTYNGQKLLIRDVISRRCKPWNIEPP
CKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRCSLFEQCY
ELQPTFQLLLQRPDKLALNLEECTPFTERPLGEAGNIHYITDVEDIGHLVNFRLEHLRQM
QSMQYYAPHANADAAPPETGNGDIVLDNAKDGTEKENGEATDAVNNDKIEEDTVESKDDT
VQEVNKMDEGNVTREDKMGEESADEAKDKMVETTAEVAIENNIVEVNANVAKDKMDEENA
LSKGVEQD
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtctacggcaccggagtcttcgagttccggcacccccgcgccgccgagtac
ccgctccccgccgaggtctccacctcagcggcacctgacaggacccccgcctccactggc
gtctccattacactcctcgacatccagcgcgaccgcctcacccgcgctgccgcggagcac
tggggctcgccagcagccgccgccgccttcgatgctgacctcgtaagggagatctacgcc
actgagctccgtgtggagggccgcggtcgcaagacggtcccgcttcaccgtgtcatgatc
ctcgaggtcagccagtacctcgagaactacctttggccacacttcgatccagacgacgcg
tcctttgagcacgtcatgtccatgatcctcatggtgaacntgcagtttcgagagaatgtg
gcggcatggacatccttccatggccggaaggacgcgttcaaaggcttcctatggcgcgtt
ctcaagctaaaggaagaggatagggatgttagtatggcagagaagacaaactacctcttg
tttatgataaacgcatttcagagtttggaggatgaaattgtccgggagactattctccag
gcagtaagcttaaagttgtggcatactctttcttttggacgacttcagatggagctttgc
cttaatcctgaattgattaagaagtggacaaaaattaaaagaaaagaagcaaaggaaggg
aaaaaggctgggaaaactggtaattcttcagaaatgctcgagaataaattccttaggaac
ctaatggaagaattcctggagattcttgattcaaaggtcatattatctagtcaagatggt
ggagaagaatctgtctttaatgaatcccttagtgggcaggttgatgattctagtgtcttg
tattgtgaaagattcatggaatttctgattgatatgttgagccagcttcctacgagaaga
tttctaaggccgcttatcgctgatgttgctgttgttgccaagtgccacttaagcatgctt
tatgctcatgaaaaggggcgtctttttgcacaattggtggacttacttcagttctatgaa
ggctttgagattaacgatcattctgggacacagcttagtgatgatgatgtcttgcaagct
cactattctcgtttccaagcttttcagctgctagcattcaaacaagtgcctaagttgcga
gaccttgccttgtgtaatattggttcaatccataagcgtgctgatttaacaaagaagctg
cttgtcttgtcagatatggaactgcaagatctggtttgcaataagcttaaaataatttca
gagaaggatccatggactggaaggcgtgatttccttatcgaggtcctagttgcttttttt
gagaagcgtcaatcccagaaagatgcagttaatgcacttcctctttatccaaatgaacag
atcatgtgggatgagagccttgttcctagcatcaattattctggagaaggctgtcttgcc
ctcccaaaactcaatctccaatttctgacacttcatgattatttgctgaggaattttaat
ctctttcgtcttgaatcaacatatgaaattcgtgaagatattcaggaagctgttcctcat
ctacatgcttacatcaacaatgagggggacacttcctttcgtggatggtccaggatggct
gttccaatcaaagaatttaggatcacacaagtgaagcaaccaaacattggagaggttaag
ccttctgctgtaactgctgatgttacttttagcatatcaagctacagatcacagataaaa
tctgagtgggatgctctgaaagagcatgatgtgttgtttttgttgtcaatccgcccatct
tttgaacctcttagccccgaggaggctgcaaaatcaactgtgcctgaaaggttaggattg
caacatgtacgtggttgtgaggtgattgaaatccgtgatgaggaagggggactcatgaat
gactatacaggaagggtaaagaaggatgagtggaaacctccaaagggtgagattcgtaca
gttaaaattgccttagatacagcacagtatcacattgatgcttctgagttagcagagaag
ggtgcagaaaatgtttatgggacatttaatattctaatgagaaggaaacccaaggaaaat
aatttcaaagcaatcctagaatccatacgtgatctaatgaatgaaacatgtgtagttcct
gaatggttgcataacatattcttgggttatggaaatccttctgccgcacagtggataaat
atgcctgatcttctggaaactatagattttaaggacacttttcttgatgctagccacgtt
gtgcaaagctttccagctttccaggtcacattcatcaatactgatggtacagaaaacatg
catccaagccctccctttaggatcaagttgtccaagaaaatgagggaaataagtcatgct
ctacccggcaatgtaaatgcctctgataccgcaagcaagaacaacatggttgatgatgaa
gggtctcagaaagaaaaactaaaggtggagacttacattcctgctgacccagtgccatat
cctcaagataaacctaaccagaactcagtgaggtttacacccactcaggtcggcgctata
atatctggtattcaacctgggttgacgatggttgttggtcctcctggaacgggaaaaaca
gatacagctgtgcagatattaaatgttctatatcataactgtccttcacaaagaacactt
attataacccattcgaatcaagctttgaatgatttgttcgagaagataatgcagaaggat
gtgcctgctaggtaccttcttcgtcttggtcagggtgagcaagaactggcaactgatctt
gattttagccgtcaaggtcgtgtaaatgctatgctggttcggcgactagagctgcttggt
gaagttgcaaaactggcaagatcccttcatcttcctgaagatgtgagctacacatgtgaa
aatgctgcatatttttggttattacatgtttatgcccgctgggaacaattcttggctgcc
tgtgtgccaaataaggagaatccctcttttgttaaagaccgttttccattttccgagttc
ttttcggatacccaacagcctgtgtttactggtgagtcctttgagaaagatatggatgca
gccaaaggatgtttcaaacatctttctacgatattccaagagctggaagagtgcagggct
tttgagttactgaagtcaacagctgagcgagcaaattatctaatgactaaacaagctaag
attgttgccatgacttgtactcatgcagcattgaagagaagagactttcttcaattgggt
ttcaaatatgacaatttactgatggaagaaagtgcacagatattggagatagagactttt
ataccaactctcctgcaacggcaggaagatggctatgctcgtctcaaacgttgcatttta
attggtgatcaccatcagttaccccctgtcgtgaagaacatggcttttcagaagtacagc
cacatggaccagagtctcttcacaaggtttgttcgccttggtgtcccttatattgaactc
aatgctcagggtcgtgccagacctagtattgctcagctttataattggagatacagagaa
ctgggagatctgccttatgtacatgaggaagctatattccataaagctaattctgggttc
tcttacgagtatcagctggttgatgttcctgattatcgtggcagaggcgagtctgctcct
tctccttggttctaccagaatgaaggggaggctgagtatattgttagtgtctatatttac
atgcgtctgattggataccctgccaataagatttcaatattaaccacttacaatggtcag
aagcttcttattcgtgatgttatcagcagacgatgcaagccatggaatattgagccacct
tgcaaggttactacggtggacaaattccagggtcaacaaaatgattttattttattgtct
cttgtccggacccgatttgtgggtcatcttcgtgatgtcagaaggcttattgtggcaatg
tcccgtgctcggttgggtttatatgtgttctgccgctgttctctgtttgaacaatgctat
gaactgcagccaacattccagcttctactccaaaggcccgataagcttgcgttaaatctt
gaagagtgcactccgtttacagagcgacctttgggagaagctggaaatattcattatatt
actgatgttgaagatattggacacttggtgaacttcagactggaacatcttcgccagatg
caatccatgcaatattatgcaccccatgcaaatgctgatgcagcccctcctgaaactggc
aatggtgatattgttttggataatgcgaaggatggcacagagaaagaaaatggtgaggca
actgatgctgtgaacaatgacaagatagaggaagatactgttgagtcaaaagatgatacg
gtgcaggaagtaaacaagatggatgaaggtaatgtgactagagaagacaagatgggggaa
gaaagtgctgatgaggctaaggacaagatggtggaaactactgctgaagtggctattgag
aacaacatagtggaagtaaatgccaatgtggccaaggacaagatggacgaagaaaatgcc
ttgtcaaagggcgtggagcaagattga
DBGET
integrated database retrieval system
