Triticum dicoccoides (wild emmer wheat): 119295960
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Entry
119295960 CDS
T07278
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119295960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119295960
Membrane trafficking [BR:
tdc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119295960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TopoV_HHH
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
119295960
NCBI-ProteinID:
XP_037430283
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Position
4B:273251738..273270022
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AA seq
782 aa
AA seq
DB search
MAADPSAAAAPADPDGPDAVRFTWNAWPRSKVEASRCVVPLAVAISPVRSPESLASPPLP
YPPLRCKPPCSALLNPFARVDFAAKIWICPLCFSRNHFPPHYAGISGNNVPAELFTQCST
VEYLVAGPPGSPAPLPPVFLFVIDTCVIEEELEYVKLSMRKAVALLPEHALVGLVTFGTQ
VHLHELGFSELSKIYVFRGSKEISKEQILDQLGLSGGGRPGFPKMTQQPGVQQVNGMHPL
VTTGVNRFLLPVSDCECTLSTLLDELQPDQWPVEAGNRAIRCTGVALNVAAGLLGACVPG
TGARIIALLGGPCTEGPGVIVSKDLSEPVRSHKDLDKDAAPHFQKAVKFYDGLAKQLVSQ
GHVLDVFASALDQVGLAEMKLAIERTGGLVVLSESFGHSVFKDSFKRIFEGGEHSLGLSF
NGTFEINCSKDIKVQGVIGPCTSLEKKGALCADTIVGQGNTTAWKMCGLDRNTSLTVFFD
VSPSERSGQPGHQNPDLYIQFVTSYQHPEGQMRIRATTVSRKWVDGSTNTEELVEGFDQE
TAAVVLARYISLKMEIEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFSLHSNFSLFPQF
MFNLRRSQFVQVFNNSPDETAYFRMLLNRESITNSVAMIQPSLISFSFDSPPSPVFLDVA
SIAVDRILLLDAYFSVVIFHGMTIAQWRNMCYQNQPEHQQFAQLLQAPQEEAQVIINGRF
PVPRLVVCDQHGSQARFLLAKLNPSATYNSAHDVPPGSDIIFTDDVSFQVFCEHLQRLAV
QS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacccctctgcggctgcggcgcccgccgaccccgatggcccggacgcggtc
cgcttcacatggaacgcctggccccggtccaaggttgaagccagccgctgcgtcgtcccg
ctcgccgtcgccatctccccggtccgctcccccgagtccctcgcgtcaccgccccttccc
tacccgccactccgctgcaagccgccttgctccgcgctcctcaaccccttcgcccgtgtg
gacttcgccgccaagatctggatctgcccgctctgcttctcgcgcaaccacttccccccg
cactacgccggcatctccgggaacaacgtgcccgccgagctcttcacacaatgctccacc
gtcgagtacctcgttgccggacccccgggatcgcctgcaccgctgccgccagtgttcctg
ttcgtcatcgacacctgcgtcatcgaggaagaactggagtacgtcaagctgtccatgcgg
aaggcggtcgcgcttctgccggagcacgcacttgttggcctggtgaccttcgggacgcag
gtgcatctgcacgagcttgggttctccgagctcagcaagatctacgtgttccgggggagc
aaggagatctccaaagagcagattttggatcagcttgggttatcaggcggggggcggcca
gggttcccaaagatgacacagcagccaggcgtgcaacaggtcaatgggatgcatccatta
gtcacgacaggggttaacaggttcttgctcccggtatcagactgcgagtgcacgctcagc
acgctgctggacgagttgcagcctgaccagtggccggttgaggctggtaaccgtgccatc
aggtgcacgggtgttgcgctaaatgtggcggctgggttgcttggggcgtgtgtgcctggg
actggcgcaaggattattgcgctacttggcgggccatgtaccgaaggtcctggagtgatt
gtatcaaaagatttgtctgagccagttagatcacacaaggatcttgataaggatgcggcg
cctcatttccagaaagctgtcaaattttacgatggccttgccaaacaactggtcagtcaa
ggtcatgttctagatgtgtttgcatctgctcttgatcaggttggactagctgagatgaag
cttgctattgagagaacaggcggccttgttgtcttatctgagagttttgggcattctgtg
tttaaggattcttttaaacgtatttttgagggaggtgaacattcattgggcctgtcattc
aatggcacatttgaaataaactgttcaaaggacattaaagttcagggtgttattggaccg
tgtacatctttggagaagaaaggagctttatgtgcagacacaattgtcggtcagggaaac
acaacagcatggaaaatgtgtgggcttgataggaatacttcacttacagttttttttgat
gtctcaccgagtgaacgctctggccaaccaggtcatcaaaatcccgatttgtacatacag
ttcgtaaccagttaccaacacccggaaggtcaaatgagaataagagctactactgtatcc
agaaaatgggtggatggttctaccaatactgaggaactagtcgaaggatttgaccaggaa
actgcagctgttgtgttggcaagatacatctccttgaaaatggaaatagaggaagagttt
gatgcaacacggtggctcgatagatctctcatacgactatgttcaagatttggggattat
cggaaggatgacccctcttcatttagcctacattctaatttctcactgtttcctcagttt
atgtttaatctccggcgttcgcaatttgttcaggttttcaataacagtccagatgaaaca
gcctatttccgaatgttactcaaccgagagagtatcactaattcagttgcaatgattcag
ccatcattaatttcattttctttcgattcacctccttctcctgtattcctcgatgtggca
tcaatagcagtagatcgtatactgctgcttgatgcatacttcagtgttgtcatattccat
ggaatgacaatcgctcagtggagaaacatgtgttatcagaatcagccggagcatcagcaa
ttcgcacaattattacaagctcctcaggaggaggcccaggtgataataaatggtcgattt
ccagttcctcgactagttgtctgtgaccaacatggctcccaggcaaggttcttgttagca
aaactaaatccatcggccacatataattcagcacatgatgttccaccaggttctgacatc
atattcactgatgatgtcagcttccaggtcttctgtgagcatctacaaaggctggctgtt
cagtcgtaa
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