Triticum dicoccoides (wild emmer wheat): 119296005
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Entry
119296005 CDS
T07278
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119296005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119296005
Spliceosome [BR:
tdc03041
]
Complex C
Other components
Step II factors
119296005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
119296005
NCBI-ProteinID:
XP_037430322
LinkDB
All DBs
Position
4B:complement(297238183..297242389)
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AA seq
572 aa
AA seq
DB search
MDLLQSSYAPGDASSPEDESLSSPDTSPLRLPSKSAAPAVDETALALSAAAAAASTSRPL
DPSLHLIPFNPTADQLWAPVLGPQHPHAPISSASGHRNHKLGHVEDAALLPFLFDEQYNT
FHRFGYASDPSGLHIIGDAQPQAPDLDTVYNLPPSEHKRRRIQSREENHEPLPPEAQNPA
SDEWVVHNKQSPWAGNREGPPVELTDEQRQYADAHAAKKAEKEARGEGKEKTEVVVKSTF
HGKEEKDYQGRSWITPPKDAKATTERCYIPKRCVHEWVGHTKGVSAIRFSPKYGHLLLSA
SMDCKIKIWDVLESKTCMRTYMGHSKAVRDISFSNDGSKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIAVHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVSFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLK
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcctcgtacgcgcctggtgacgcgtcctcgccggaggacgagtcg
ctctcctccccggacacctccccgctccgcctcccctccaagtccgccgcccccgccgtc
gatgagacagcgctcgcgctatccgccgccgccgccgccgcttccacctcccgtcctctc
gacccctccctccacctcatccccttcaaccccaccgccgaccagctctgggcgcccgtc
ctcggtcctcagcacccccacgcgcccatctcatccgcctctggtcaccgtaaccacaag
ctcggtcacgtcgaagacgcagcgctcctccccttcctcttcgacgagcagtataacact
ttccatcgcttcggctacgcatctgacccctccggcctccacatcatcggcgacgcgcag
ccacaggcgcccgacctcgacaccgtctacaacctccctccttctgagcacaagcgccgc
cgcatccaatccagggaggaaaaccacgagcccctccccccagaggcccaaaaccctgca
tccgacgagtgggtcgtgcacaacaaacagagtccctgggctggcaatcgggagggcccg
cctgtggagctcacggacgagcagagacagtacgccgacgcacatgcggccaagaaggct
gagaaggaggcacgaggcgaagggaaggagaaaacagaggtggtggtcaagagcaccttc
catgggaaggaggagaaggactaccagggacgatcgtggatcactccacccaaggatgcc
aaggcgaccaccgagcgctgttatattcccaagaggtgtgtacatgagtgggttggacac
actaagggggtctcagcgatcagattttcccccaagtacggccatctattgctgtctgca
agtatggattgtaagattaaaatctgggacgtgcttgagtcgaagacatgtatgcggacg
tacatggggcactccaaggcggtacgggatatatcgttctctaatgacggtagtaagttc
ttgagtgctggctatgaccggaatattcagtattgggataccgaaactgggcaggtgatc
tcgaccttctctactggtaaggtaccttatgtcgtgaagctcaatcctgatgaagataag
cagcatattctccttgctgggatgagtgacaagaagattgtgcagtgggatatgaagtca
gggcagatcacacaggaatatgatcagcacttgggggcggtgaacactattacctttgta
gataataataggaggtttgtgacatctagcgatgacaagtctcttcgtgtgtgggagttt
ggcatccctgtagttattaagtatatcagtgagccgcacatgcactccatgccgtctatt
gcagtacacccgaactctaactggctggcagcacagagcttggacaatcagatactgata
tacagcaccaaggaaaggtttcaacttaataagaagaagaggtttgcaggtcacattgtg
gcaggttatgcttgtcaggtgagcttctctcctgatgggaggtttgtgatgtcaggagac
ggtgaaggtagttgctggttctgggactggaaaagctgcaggagattcaagacattgaag
tgccacaatggagtttgcattggatgtgagtggcatccattggagactagcaaggttgca
acatgtggatgggatggtgtcataaaatactgggattaa
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