Triticum dicoccoides (wild emmer wheat): 119296307
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Entry
119296307 CDS
T07278
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119296307
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
119296307
NCBI-ProteinID:
XP_037430609
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Position
4B:397638334..397646747
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AA seq
1166 aa
AA seq
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MASGSRATPTRSPSSARPAAPHQNHTQSSGGSTSRAGGGGGGAAGSAAATESVSKAVAQY
TLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAV
ADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGVLLERA
FAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLA
VRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRRGDLEPY
LGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPSMPQPLCLVGSTLRSPHGCH
AQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCIPFPLRY
ACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC
DGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATALGDAV
CGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS
LPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSSVAREM
VRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKESEEIVEKLL
SQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVGVCFVGQDITGQKVV
MDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGEVVGKLLVGE
VFGNCCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGKYVQALLTANTRSKMDGE
TIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSLLEMT
DLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGNVMNAVVSQVMIL
LRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPTENGWVEIQVRPNVKQ
NSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIALSICRKILKLMGGEVQYI
RESERSFFLIVLELPQPLRSESRDRS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaagccgcgccacgcccacgcgctccccctcctccgcgcggcccgccgcg
ccgcaccagaatcacacgcagtcctcgggcgggagcacctcccgcgcaggagggggaggg
ggaggcgcggccgggagcgcggccgccacggagtcggtctccaaggccgtggcgcagtac
accctggacgccggcctccacgcggtgttcgagcagtcgggcgcgtcggggcgcagcttc
gactactctcagtcgctgctcgcgccgcccactccctcctccgagcagcagatcgccgcc
tacctctcgcgcatccagcgcggcggccacatccagcccttcggctgcacgctcgccgtc
gccgacgactcctccttccgcctcctcgccttctccgagaacgccgccgacctgctcgac
ctatcgcctcaccactccgtcccgtcgctcgactcctccgcggcgcctccccccgtttct
ctcggcgccgacgcgcgcctcctcttctctccctcctccggcgtcctccttgagcgcgcc
ttcgccgcacgggagatctcgctgctcaacccgctctggatccactccagggtctcatcc
aagcccttctacgccatcctccaccgcatcgacgtcggcgttgtcatcgacctcgagccg
gcccgcaccgaggacccggccctctccatcgctggcgcagtccagtcccagaagctcgcc
gtccgcgccatctcccgtctccaggcgctccctggcggggacgtcaagctcctctgcgac
accgtcgtggagcacgtccgtgagctcacgggctatgaccgcgtcatggtgtacaaattc
cacgatgacgagcacggggaagtcctcgccgagagccggcgtggtgacctcgagccctac
ctcggtttgcattatcctgccactgatatcccgcaggcatcacgcttcctgttccggcaa
aaccgtgtgcggatgattgctgattgccacgcagctgcggtgagggtcatccaggaccct
tcaatgccacagccgctgtgcttagttgggtcgactcttcgctccccgcatgggtgccat
gcgcagtacatggcaaacatggggtcgattgcatctctcgtcatggcagtgatcatcagt
agcggtggggaggatgagcacaacatgacgcggggcgtcatcccgtcggcgatgaagttg
tgggggttagtggtgtgccaccacacatctccacggtgcatccctttcccactgcggtat
gcatgtgagttcctcatgcaggcctttgggctgcagctcaacatggagctgcagcttgcg
caccaactatcagagaaacatattctcagaacacagacgttactgtgcgacatgctactc
cgggattcacctactggcattgtcacacagagcccaagcataatggaccttgtgaagtgt
gatggtgccgcactgttttaccacgggaagtactacccacttggtgtcacccccacagag
gctcagattaaggatatcatcgagtggttgacggtgtgccatggagactccacagggctc
agcacagatagcctggctgatgcaggctaccccggtgctactgcattaggggatgcagtg
tgcggaatggcagtagcttatatcacgccgagtgattatttattttggttccggtcacac
acagccaaggagataaaatggggtggtgcaaagcatcatccggaggataaggatgatggg
cagcggatgcacccacgatcatcattcaaggcatttcttgaagtggtgaagagtaggagc
ttaccttgggagaatgctgagatggatgcaatacattccttgcagctcatattgcgggac
tccttcagagatgcaggagagggtactagtaactcaaaagccattgtcaatggtcaggtt
cagcttggggaactagagttgcggggaatagatgagctgagttcagtagcaagggagatg
gttcgattgatcgagacggctacagtacccatctttgcagttgatacttatggatgtata
aatgggtggaatgcaaaggttgctgagttgactggcctcacagttgaagaagctatgggc
aaatcattagttaaagatcttatcttcaaggaatctgaagaaatagttgagaagctactc
tcgcaagctttaaaaggtgaagaaggcacaaatgtagagataaagttgaagacatttggg
tcagagcaatctaaaggaccaatttttgttattgtcaacgcctgctctagtagggattac
accaaaagtattgttggtgtttgttttgtcggccaagatatcacagggcaaaaggtggtc
atggataaatttgtcaacatacaaggggattacaaggctattgtacacaatcccaatcct
ctaataccgccaatatttgcttcagatgagaacatatgttgctccgaatggaatacggca
atggaaaaactcacaggatggtcgagaggagaagttgttggtaagcttctggttggggag
gtatttggaaattgttgccgactcaagggcccagatgcactgacaaagttcatgattgtt
cttcacaacgctataggagggcaggattctgagaagtcccccttttcattctttgacaag
aatggtaaatatgtacaggccttattgaccgcaaacacaaggagcaaaatggatggtgag
accataggtgccttctgcttcttgcagattgcaagccccgaattacagcaagcctttgag
attcagagacaacaagaaaagaagtgttatgccaggatgaaggagttggcttacatttgc
caggagataaaaaaccctctcagtggtatacggtttacaaactccctgttagagatgact
gatttaaaggatgaccagaggcagtttcttgaaactagcgctgcttgtgagaagcagatg
tccaagattgtaaaggatgccagcctccaaagtattgaggatggctctttggtgcttgag
aaaggtgaattttcacttggaaatgttatgaatgctgttgtcagccaagtgatgatattg
ctaagagaaagagatttgcaacttattcgagatatccctgatgaaatcaaagaagcctcg
gcatatggtgaccaatatagaatccagcaagttttgtctgactttttgcttagcatggtg
cggtttgctccaactgaaaatggctgggtggagatacaagtcagaccaaacgtaaaacaa
aattctgatggaacggaaacaatgctcttcctcttcagatttgcctgtcctggtgagggc
ctcccccctgacatagtccaagatatgttcagtaacgctcgttggacgacccaagaaggc
attgcactaagcatatgcaggaaaatcctcaaattgatgggtggtgaggtgcagtacatc
agagagtcagagcggagtttcttcctcattgtgcttgagctaccccagcctctgcgatca
gaaagtagggatcggagctga
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