Triticum dicoccoides (wild emmer wheat): 119298804
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Entry
119298804 CDS
T07278
Name
(RefSeq) PH-interacting protein-like
KO
K11797
PH-interacting protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119298804
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119298804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Bromodomain
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS8_N
Auxin_resp
Agenet
Motif
Other DBs
NCBI-GeneID:
119298804
NCBI-ProteinID:
XP_037432000
LinkDB
All DBs
Position
5A:complement(12864105..12880135)
Genome browser
AA seq
1681 aa
AA seq
DB search
MFADIDFRKHQPSGNATSTSMVPLDVPSQAPEKINSLNQVISADVPCEAPVDFDTRELYF
LIAHFLSHGPLKRTAGELCSELQEHHLLPRRYHAWYSRGGFHSGEENDDGVSLPLDYLKL
VERYPHIGKDHLVKLLKQLMVSSCHPESLIGAVSPNAADVPTLLGSNSFSLLASNRGRQE
KENHRLPTYLRWPHIQADQVHGLSLREIGGFTKNHRAPSVRASCYAIAKPSTLVEKMQII
KKLRGHQNAVYCATFDRTGRFVITGSDDRLVKIWAMETAFCLASCRGHEGDITDLAVSSN
NAVVASSANDFVIRVWRIPDGMPISVLKGHTGVVTAIAFSPRPGAAFQLLSSSDDGTCRI
WDARYSQQPPRIYTPKPPDAAPGKSGDASSSAVQVQPINHQILCCAFNANGTVFVTGSSD
TFARVWNACKSSSEEHDQPNHEMDVLSGHENDVNYVQFSGCVVSRSFSSEGSHTTKEENN
LKLRNSWFTHNIVTCSRDGSAIIWVPRSRRSHGKIGRWTRAYHLKVPPPPMAPQLVRGGP
RQRHQPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLIGHKESTFVLDVHP
FNPRIAMSAGYDGMTIIWDIWEGKPVQIYETGHFKLVDGKFSPDGTSLILTDEIGQIFFI
GTGQGESQKDAKYDQFFLGDYRPLTQDTNGNVIDQETQLPPYRRNIQDLLCDSGMMPYPE
PFQSMYQKRRLGTMGIEWRPPSVDFAVGPTYNATTGEYQIIPVIDPDRWEPLPEIPDFFE
LEPEIEVISDDTDSEYNGMDDKSSEGEQENLSGDSSGASYSSAEIDGNNLSDSANLRRSR
RKKKKSKADLVTSSGRRVKKRNLDEHDAATVSRSHRARKSKNGRSSKRKRSPKSRGLRPQ
RRAARHALSFLTKMGASTDEDEEDSESLSDSELNTESIEAEPSAWYSRPRLGRESNQYDS
EDVTQPSHFTETRGSSGNNRKLVLRIPRRDLKVEFPSAVSVMGGRHGSVEPELAFEPGSS
SVCKADPPADGGQSTTTSGLHDVSSVYSNSTIKWGEVKQRSSKRCKFGDSSAGDMWPSSN
NAVSQDGGKSGVQKTPHEYGNAMQQTVEQTVQKSERAICLDSIHENHDTDVYSEDNLLGE
ERTTNNNNTHVEEVNNKECNQQSHSTTQSTIKLKLVRSRGIPDAKGSPDKSKTTAVGSDV
NSECDKVPMQHDEDPTTNQHISSDFPSASRDFQECTDKSTGFHDSRKFHSESGKTIAVYQ
RSKLSKHKKKLDSDSGNGDSTSVSNDDGGYQPSEYSPVAPGTGNLRRSTRRSCAYTDGGA
RNAISHVKNSSHEASTSGRQIGADVHEWGSPSKTAGLRSTRNRVPDTHSLAEKPQVSSSC
WLMLLEHEDIYRYIPQHGDEVMYLRQGHEEYLKGMRLSDSCPWNRIKGLKAVELCKIQDL
CYTTYKGSGESCCKLTLKFIDDTSSGFNREFVITLPELVGFPDFLVERTRFEAAVAQNWT
IRDKCRIWWANDEGGGSWWEGRVLAIRPKSPDFPESPWDKYAVQYKNDGSDHLHSPWELY
DADSPLVPWKHPHIDSSIRNKLLSAVNNLQNKSRRNQDHYGVLKLDTVAGKSEFINRFPV
QFSMEVIRTRLQNGYYRSVEAVQHDASVMLANAESYFSKSADMTKKLLRLSEWVEDNILS
L
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagacatagattttagaaagcaccaaccttctggtaatgcaacctctactagt
atggtgcccctggatgttccaagtcaggcacctgagaagattaattctctgaatcaagtg
atttcagcagatgtaccatgcgaggctcctgttgattttgatacgagagaactttacttt
ctcattgcgcacttcttatcacatggtccattaaagcggactgctggagaactttgcagt
gaactccaggagcatcatctgcttcctagaagatatcatgcttggtattcgcgtggtggt
ttccatagtggcgaagaaaatgatgacggtgtatcactccctttggattacctcaagtta
gttgagagatatccccacattggtaaagaccacttggtaaagcttttaaagcaactgatg
gttagttcctgccacccagagagcttgattggagctgtgtctccaaatgctgctgatgtt
ccaacccttcttggctccaactcattttcccttcttgcatctaataggggccggcaagaa
aaggaaaatcacaggttgccgacgtatctccgttggccacatatacaggctgatcaagtt
catggtttaagtttaagagagattggtggcttcactaagaatcatcgagctccttctgtc
cgtgcatcatgctatgccattgcgaagccatctacccttgttgaaaagatgcaaattata
aagaaattgaggggacatcaaaacgctgtgtattgtgctacttttgatcgcacagggcgt
tttgttattactggttctgatgatcgccttgttaaaatttgggcaatggaaactgcattt
tgtctggctagctgccgaggtcatgaaggtgatattactgacctcgcggtgagttccaat
aatgctgtggtagcatcttcagccaatgatttcgttattagagtgtggcgtatacctgat
ggcatgccgatctcagtgttgaaggggcatacaggggttgtaactgctattgcatttagc
ccaaggccaggtgctgctttccagctattgtcatcatcagatgacgggacatgcaggatt
tgggatgcccgatattctcaacaacctccacgaatatatacaccaaaacctccagatgct
gcccctgggaagagtggtgatgcatcttccagtgctgttcaagttcaaccaataaatcac
caaatcttgtgttgtgcatttaatgccaatggaactgtgtttgttactggcagctcagac
acttttgcaagggtgtggaatgcttgcaagagtagttctgaggaacatgaccagccgaat
catgagatggatgtattatcgggccatgaaaatgatgtaaactatgtgcagtttagtgga
tgtgtggtatctagatccttttcatctgaaggcagccacaccactaaggaagaaaataat
cttaaactaagaaattcatggttcacacataatattgttacttgctcccgtgatggcagt
gcaattatatgggttccacgatctcggagatcgcatggaaagattggacgatggacacgt
gcttaccatctcaaggtccctccacctccaatggctcctcaactagttcgtggtggccca
cgacaaagacatcagccaactcctcgtggtgtcaatatgattgtctggagtttggataac
cgatttgtgcttgctgctatcatggactgcagaatttgtgtttggaatgcttctgatggg
agcttagtacattcactgattggccacaaggaatctacatttgttcttgatgtgcatcca
ttcaaccctcgtatagcaatgagtgctgggtatgatggcatgacaatcatctgggatata
tgggaaggaaaacctgtacagatctatgaaaccggtcattttaagctagttgatggcaag
ttctctccggatggaacatcacttatcctcaccgatgagattggccaaatattctttatt
ggtacagggcagggtgagtcccagaaggatgcgaaatatgatcagttctttcttggagac
tatcgaccccttactcaagatacaaatggaaatgttattgatcaggagacacagctccca
ccttataggagaaatattcaagaccttttgtgtgactcgggtatgatgccatacccagag
ccttttcaaagcatgtaccagaaacggcgattaggtaccatgggtattgagtggcggcct
ccctctgtagattttgctgttggccccacgtacaatgcaaccactggtgaataccagatc
atcccagtcattgatccagataggtgggagccacttccagagataccggacttctttgag
cttgaacctgagattgaagttatctctgatgatactgattccgagtacaacggcatggat
gacaagtctagtgaaggagaacaggagaatttgagtggtgattcctctggtgcttcatac
tcaagtgcagagattgatgggaataaccttagcgatagtgctaatcttcgcagatctaga
agaaagaagaaaaaatcaaaggctgatcttgtgacttcatctggtcggcgagttaagaag
aggaatttggatgagcatgatgctgctactgtgtcaaggtcacacagagctaggaagtct
aagaatggtcgctctagtaaaaggaaaagatcacctaaatccaggggattgcgacctcaa
agacgcgctgctcgccatgcactcagttttttaacaaagatgggagcttcaacagatgag
gatgaagaggactcagagagtctctcagacagtgaattgaacacggaaagcattgaagct
gagccgtcagcatggtatagccggccaagacttggtagagagagtaaccaatatgattca
gaagatgttacacaaccttctcatttcactgaaactcgggggagttctggaaataacaga
aaactggtcctgaggataccacgccgtgatttaaaagttgaatttccatcagctgtatca
gtcatggggggcagacatggatcagttgagccggaactagcttttgagcctggaagttcc
tctgtttgcaaggctgacccacctgcagatggaggtcaaagcacaacaacctctggtcta
catgatgtttcttctgtttatagtaacagcacaatcaagtggggtgaggttaagcagcga
tcttcaaagcgttgcaagtttggtgactcttccgctggagacatgtggccctcttcaaat
aatgcagtttcacaggatggtggcaaatctggtgttcagaagacacctcatgaatatggt
aacgccatgcaacaaacggttgagcagactgtacaaaagagtgaacgtgcaatttgtctg
gatagcatccatgaaaatcacgatactgatgtttatagtgaagataatttacttggtgaa
gaaaggacaactaataacaataatactcatgtagaggaagtaaacaacaaagaatgcaac
caacagtcccacagtactactcagtctactattaaactgaagttagtcaggtcaagaggc
attccagatgcaaaaggttcaccggacaaatcaaagactactgcagtagggagtgacgtg
aactctgagtgtgataaagttcccatgcagcatgatgaggatcctaccaccaatcaacat
ataagcagtgacttccctagtgcgtctagagatttccaggaatgcacagataaaagcact
ggttttcatgattcaaggaagttccattctgaatctgggaagacgattgctgtgtaccaa
aggtcaaagttaagtaagcacaagaaaaaattggattcagattctggcaatggagatagt
acctccgtctccaatgatgatggtgggtatcaaccttcagagtacagtcctgttgcacct
ggtactggtaatttgcgaagaagcacaaggaggtcatgtgcatacactgatggtggagca
aggaatgctatctctcatgtgaaaaattcttcccatgaagcatcaactagtgggagacaa
attggtgcagacgtgcatgagtggggttcaccatcaaagactgctggtttaaggtctact
aggaacagagttcctgatacacattcattggcagaaaagcctcaagtatcctcgagttgt
tggttgatgttgttggagcatgaagatatttaccgttatattcctcaacatggcgatgag
gttatgtacttgcgacagggccatgaagaatatcttaaaggaatgcgattatcggatagt
tgcccatggaatcggatcaaaggccttaaagctgtagagctttgcaaaattcaggatctt
tgttataccacttataaagggtctggtgaaagctgctgtaaattaacacttaaattcatt
gacgacacttcaagcgggtttaacagagagtttgtaatcacattgcctgagctggttggc
ttccccgattttctggtggaaagaacacggtttgaagctgctgttgcgcagaactggact
atcagagataagtgcagaatttggtgggcgaatgatgagggaggaggaagttggtgggag
ggacgtgtgttggcaataagacctaagtcacctgattttcctgagagtccatgggataaa
tatgccgtacagtacaagaatgatggttcagatcatctgcatagcccctgggagctctat
gatgctgatagcccattggttccatggaaacatccacatattgattccagtattaggaat
aaattgttatcagcagtgaataatttacagaacaagtctcgcagaaaccaggatcactat
ggtgtcctgaagttggatactgttgcaggaaaatcagagttcataaacaggtttcctgtc
cagttttccatggaggtgatcaggacaagactgcaaaatggttactacagaagcgtggag
gctgtccaacatgatgcctctgtgatgcttgccaatgccgagtcttacttctcaaagagc
gcggacatgaccaagaagcttctcaggctatccgagtgggtcgaagataacatcctatca
ctttag
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integrated database retrieval system