KEGG   Triticum dicoccoides (wild emmer wheat): 119298804
Entry
119298804         CDS       T07278                                 
Name
(RefSeq) PH-interacting protein-like
  KO
K11797  PH-interacting protein
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdc04121]
    119298804
Ubiquitin system [BR:tdc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119298804
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Bromodomain Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 VPS8_N Auxin_resp Agenet
Other DBs
NCBI-GeneID: 119298804
NCBI-ProteinID: XP_037432000
LinkDB
Position
5A:complement(12864105..12880135)
AA seq 1681 aa
MFADIDFRKHQPSGNATSTSMVPLDVPSQAPEKINSLNQVISADVPCEAPVDFDTRELYF
LIAHFLSHGPLKRTAGELCSELQEHHLLPRRYHAWYSRGGFHSGEENDDGVSLPLDYLKL
VERYPHIGKDHLVKLLKQLMVSSCHPESLIGAVSPNAADVPTLLGSNSFSLLASNRGRQE
KENHRLPTYLRWPHIQADQVHGLSLREIGGFTKNHRAPSVRASCYAIAKPSTLVEKMQII
KKLRGHQNAVYCATFDRTGRFVITGSDDRLVKIWAMETAFCLASCRGHEGDITDLAVSSN
NAVVASSANDFVIRVWRIPDGMPISVLKGHTGVVTAIAFSPRPGAAFQLLSSSDDGTCRI
WDARYSQQPPRIYTPKPPDAAPGKSGDASSSAVQVQPINHQILCCAFNANGTVFVTGSSD
TFARVWNACKSSSEEHDQPNHEMDVLSGHENDVNYVQFSGCVVSRSFSSEGSHTTKEENN
LKLRNSWFTHNIVTCSRDGSAIIWVPRSRRSHGKIGRWTRAYHLKVPPPPMAPQLVRGGP
RQRHQPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLIGHKESTFVLDVHP
FNPRIAMSAGYDGMTIIWDIWEGKPVQIYETGHFKLVDGKFSPDGTSLILTDEIGQIFFI
GTGQGESQKDAKYDQFFLGDYRPLTQDTNGNVIDQETQLPPYRRNIQDLLCDSGMMPYPE
PFQSMYQKRRLGTMGIEWRPPSVDFAVGPTYNATTGEYQIIPVIDPDRWEPLPEIPDFFE
LEPEIEVISDDTDSEYNGMDDKSSEGEQENLSGDSSGASYSSAEIDGNNLSDSANLRRSR
RKKKKSKADLVTSSGRRVKKRNLDEHDAATVSRSHRARKSKNGRSSKRKRSPKSRGLRPQ
RRAARHALSFLTKMGASTDEDEEDSESLSDSELNTESIEAEPSAWYSRPRLGRESNQYDS
EDVTQPSHFTETRGSSGNNRKLVLRIPRRDLKVEFPSAVSVMGGRHGSVEPELAFEPGSS
SVCKADPPADGGQSTTTSGLHDVSSVYSNSTIKWGEVKQRSSKRCKFGDSSAGDMWPSSN
NAVSQDGGKSGVQKTPHEYGNAMQQTVEQTVQKSERAICLDSIHENHDTDVYSEDNLLGE
ERTTNNNNTHVEEVNNKECNQQSHSTTQSTIKLKLVRSRGIPDAKGSPDKSKTTAVGSDV
NSECDKVPMQHDEDPTTNQHISSDFPSASRDFQECTDKSTGFHDSRKFHSESGKTIAVYQ
RSKLSKHKKKLDSDSGNGDSTSVSNDDGGYQPSEYSPVAPGTGNLRRSTRRSCAYTDGGA
RNAISHVKNSSHEASTSGRQIGADVHEWGSPSKTAGLRSTRNRVPDTHSLAEKPQVSSSC
WLMLLEHEDIYRYIPQHGDEVMYLRQGHEEYLKGMRLSDSCPWNRIKGLKAVELCKIQDL
CYTTYKGSGESCCKLTLKFIDDTSSGFNREFVITLPELVGFPDFLVERTRFEAAVAQNWT
IRDKCRIWWANDEGGGSWWEGRVLAIRPKSPDFPESPWDKYAVQYKNDGSDHLHSPWELY
DADSPLVPWKHPHIDSSIRNKLLSAVNNLQNKSRRNQDHYGVLKLDTVAGKSEFINRFPV
QFSMEVIRTRLQNGYYRSVEAVQHDASVMLANAESYFSKSADMTKKLLRLSEWVEDNILS
L
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgtttgcagacatagattttagaaagcaccaaccttctggtaatgcaacctctactagt
atggtgcccctggatgttccaagtcaggcacctgagaagattaattctctgaatcaagtg
atttcagcagatgtaccatgcgaggctcctgttgattttgatacgagagaactttacttt
ctcattgcgcacttcttatcacatggtccattaaagcggactgctggagaactttgcagt
gaactccaggagcatcatctgcttcctagaagatatcatgcttggtattcgcgtggtggt
ttccatagtggcgaagaaaatgatgacggtgtatcactccctttggattacctcaagtta
gttgagagatatccccacattggtaaagaccacttggtaaagcttttaaagcaactgatg
gttagttcctgccacccagagagcttgattggagctgtgtctccaaatgctgctgatgtt
ccaacccttcttggctccaactcattttcccttcttgcatctaataggggccggcaagaa
aaggaaaatcacaggttgccgacgtatctccgttggccacatatacaggctgatcaagtt
catggtttaagtttaagagagattggtggcttcactaagaatcatcgagctccttctgtc
cgtgcatcatgctatgccattgcgaagccatctacccttgttgaaaagatgcaaattata
aagaaattgaggggacatcaaaacgctgtgtattgtgctacttttgatcgcacagggcgt
tttgttattactggttctgatgatcgccttgttaaaatttgggcaatggaaactgcattt
tgtctggctagctgccgaggtcatgaaggtgatattactgacctcgcggtgagttccaat
aatgctgtggtagcatcttcagccaatgatttcgttattagagtgtggcgtatacctgat
ggcatgccgatctcagtgttgaaggggcatacaggggttgtaactgctattgcatttagc
ccaaggccaggtgctgctttccagctattgtcatcatcagatgacgggacatgcaggatt
tgggatgcccgatattctcaacaacctccacgaatatatacaccaaaacctccagatgct
gcccctgggaagagtggtgatgcatcttccagtgctgttcaagttcaaccaataaatcac
caaatcttgtgttgtgcatttaatgccaatggaactgtgtttgttactggcagctcagac
acttttgcaagggtgtggaatgcttgcaagagtagttctgaggaacatgaccagccgaat
catgagatggatgtattatcgggccatgaaaatgatgtaaactatgtgcagtttagtgga
tgtgtggtatctagatccttttcatctgaaggcagccacaccactaaggaagaaaataat
cttaaactaagaaattcatggttcacacataatattgttacttgctcccgtgatggcagt
gcaattatatgggttccacgatctcggagatcgcatggaaagattggacgatggacacgt
gcttaccatctcaaggtccctccacctccaatggctcctcaactagttcgtggtggccca
cgacaaagacatcagccaactcctcgtggtgtcaatatgattgtctggagtttggataac
cgatttgtgcttgctgctatcatggactgcagaatttgtgtttggaatgcttctgatggg
agcttagtacattcactgattggccacaaggaatctacatttgttcttgatgtgcatcca
ttcaaccctcgtatagcaatgagtgctgggtatgatggcatgacaatcatctgggatata
tgggaaggaaaacctgtacagatctatgaaaccggtcattttaagctagttgatggcaag
ttctctccggatggaacatcacttatcctcaccgatgagattggccaaatattctttatt
ggtacagggcagggtgagtcccagaaggatgcgaaatatgatcagttctttcttggagac
tatcgaccccttactcaagatacaaatggaaatgttattgatcaggagacacagctccca
ccttataggagaaatattcaagaccttttgtgtgactcgggtatgatgccatacccagag
ccttttcaaagcatgtaccagaaacggcgattaggtaccatgggtattgagtggcggcct
ccctctgtagattttgctgttggccccacgtacaatgcaaccactggtgaataccagatc
atcccagtcattgatccagataggtgggagccacttccagagataccggacttctttgag
cttgaacctgagattgaagttatctctgatgatactgattccgagtacaacggcatggat
gacaagtctagtgaaggagaacaggagaatttgagtggtgattcctctggtgcttcatac
tcaagtgcagagattgatgggaataaccttagcgatagtgctaatcttcgcagatctaga
agaaagaagaaaaaatcaaaggctgatcttgtgacttcatctggtcggcgagttaagaag
aggaatttggatgagcatgatgctgctactgtgtcaaggtcacacagagctaggaagtct
aagaatggtcgctctagtaaaaggaaaagatcacctaaatccaggggattgcgacctcaa
agacgcgctgctcgccatgcactcagttttttaacaaagatgggagcttcaacagatgag
gatgaagaggactcagagagtctctcagacagtgaattgaacacggaaagcattgaagct
gagccgtcagcatggtatagccggccaagacttggtagagagagtaaccaatatgattca
gaagatgttacacaaccttctcatttcactgaaactcgggggagttctggaaataacaga
aaactggtcctgaggataccacgccgtgatttaaaagttgaatttccatcagctgtatca
gtcatggggggcagacatggatcagttgagccggaactagcttttgagcctggaagttcc
tctgtttgcaaggctgacccacctgcagatggaggtcaaagcacaacaacctctggtcta
catgatgtttcttctgtttatagtaacagcacaatcaagtggggtgaggttaagcagcga
tcttcaaagcgttgcaagtttggtgactcttccgctggagacatgtggccctcttcaaat
aatgcagtttcacaggatggtggcaaatctggtgttcagaagacacctcatgaatatggt
aacgccatgcaacaaacggttgagcagactgtacaaaagagtgaacgtgcaatttgtctg
gatagcatccatgaaaatcacgatactgatgtttatagtgaagataatttacttggtgaa
gaaaggacaactaataacaataatactcatgtagaggaagtaaacaacaaagaatgcaac
caacagtcccacagtactactcagtctactattaaactgaagttagtcaggtcaagaggc
attccagatgcaaaaggttcaccggacaaatcaaagactactgcagtagggagtgacgtg
aactctgagtgtgataaagttcccatgcagcatgatgaggatcctaccaccaatcaacat
ataagcagtgacttccctagtgcgtctagagatttccaggaatgcacagataaaagcact
ggttttcatgattcaaggaagttccattctgaatctgggaagacgattgctgtgtaccaa
aggtcaaagttaagtaagcacaagaaaaaattggattcagattctggcaatggagatagt
acctccgtctccaatgatgatggtgggtatcaaccttcagagtacagtcctgttgcacct
ggtactggtaatttgcgaagaagcacaaggaggtcatgtgcatacactgatggtggagca
aggaatgctatctctcatgtgaaaaattcttcccatgaagcatcaactagtgggagacaa
attggtgcagacgtgcatgagtggggttcaccatcaaagactgctggtttaaggtctact
aggaacagagttcctgatacacattcattggcagaaaagcctcaagtatcctcgagttgt
tggttgatgttgttggagcatgaagatatttaccgttatattcctcaacatggcgatgag
gttatgtacttgcgacagggccatgaagaatatcttaaaggaatgcgattatcggatagt
tgcccatggaatcggatcaaaggccttaaagctgtagagctttgcaaaattcaggatctt
tgttataccacttataaagggtctggtgaaagctgctgtaaattaacacttaaattcatt
gacgacacttcaagcgggtttaacagagagtttgtaatcacattgcctgagctggttggc
ttccccgattttctggtggaaagaacacggtttgaagctgctgttgcgcagaactggact
atcagagataagtgcagaatttggtgggcgaatgatgagggaggaggaagttggtgggag
ggacgtgtgttggcaataagacctaagtcacctgattttcctgagagtccatgggataaa
tatgccgtacagtacaagaatgatggttcagatcatctgcatagcccctgggagctctat
gatgctgatagcccattggttccatggaaacatccacatattgattccagtattaggaat
aaattgttatcagcagtgaataatttacagaacaagtctcgcagaaaccaggatcactat
ggtgtcctgaagttggatactgttgcaggaaaatcagagttcataaacaggtttcctgtc
cagttttccatggaggtgatcaggacaagactgcaaaatggttactacagaagcgtggag
gctgtccaacatgatgcctctgtgatgcttgccaatgccgagtcttacttctcaaagagc
gcggacatgaccaagaagcttctcaggctatccgagtgggtcgaagataacatcctatca
ctttag

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