Triticum dicoccoides (wild emmer wheat): 119299173
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Entry
119299173 CDS
T07278
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119299173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119299173
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119299173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
119299173
NCBI-ProteinID:
XP_037432323
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Position
5A:complement(50543789..50550666)
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AA seq
809 aa
AA seq
DB search
MITGGQSYVSAPPAFSADGRFLLVCSGCSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ
SSAAAAAKLATHCWTAGLDGFLIYWDFATAELVRKVKVDAPVHSMVIPNISKKLKLTEVY
APFAFVSVEALSNKAIQDKAKGKPVAKKKELWGQLRIYDLWKGCQVGSELAQTRKPEKIV
VSCSGEFLGIANKRHLYIWSIPTKDFNHDNIRKIKLGHTKKLSTLAFHPSERIVAGGDAT
GRILIWRGFGKAKFSGTHGAKSQVDEERDGVRGKDDAGTCTTWHWHSSGVNFLKFSSDGA
YLLSGGMEGVIVVWQLDTGKRRYKPRLGSPLLFFVDSPDSSISCVSCTNNQVHLLNMPNM
EVLKTVAGIKLPIASADLSRRDVCGFDSTNGLVAIPTQDYCIQFYNLFENTEVSEVQVCE
RNFQPVDDITLYISLVSLSIGGNLMCTVEVKLPEEELGGLVTLKFWNQGSRAGQFHLSTV
IYEPHSDAGISAVAFHPGKNMAVSSSFGGNFKVWVQSLSLQSSDGKSQSGWRCQSVGSYK
KKPMTAAAFSGDGSVLAVAAESVITLWDPDNNALVGVIAEALSPITKLSFAGDSAYLMSL
SQSSKPQVAVWNVSNLSMEWSYTLFAEAACCSSSKSEFAVLSLLSCPEGGAPAEQDGIIL
IFDAENSKPVSSWSVKKAKGGSIAFVKDGPSFDASTDGTRGGEASLLVYVNGSHEYVIFD
PLKNEEPQISKSTRKNIQADEPAPIGYASIYGELPKLELKKEVSDIPFIPSDRPWETIFT
GSSHALPPLTKLCSVFLASLLEKRPVTDE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggcggccagagctacgtctcggcgccgccggccttctccgccgacggccgc
ttcctcctcgtctgctccggctgctccgtctccgtcttcagcacctccaccggcatgctg
gtgtcggagctggaggggcacgagggggacgtcaccgccgtcgtggtggtgccaccgcag
agcagcgccgcggcggccgccaagctcgcgacccactgctggacggcggggcttgacggc
ttcctcatctactgggacttcgccaccgccgagctggtgcggaaggtcaaagtcgacgcc
ccagtccactccatggtgattcccaacataagcaaaaaattgaaattgaccgaggtgtat
gctcctttcgcattcgtctctgtggaagctttgagcaacaaggctattcaagataaggca
aagggcaagccagttgctaaaaagaaggaattgtgggggcagctgaggatttatgacttg
tggaaagggtgccaagtgggttctgaactggctcagacacggaagccagaaaagattgtc
gtgagttgttctggagaatttttgggcattgcaaataagagacatctctatatatggagc
atacctacgaaagatttcaaccatgacaatataaggaaaataaagcttggtcacacaaag
aagttgagcaccctggccttccatccaagtgagagaatcgttgctggtggtgatgcaaca
gggaggatcttaatctggagaggttttggaaaggccaagttttctggaacacatggtgca
aagtctcaagttgatgaagaaagggatggtgtaaggggtaaagatgatgcgggtacttgc
actacatggcactggcattctagcggagtgaactttctcaaattttcttccgatggagct
tacttgctctcaggtggtatggagggtgttattgttgtatggcaactagatactggaaag
agaaggtataagccacgtctaggatctcctcttctgttctttgtagattctccagactct
tccatttcctgtgtgtcatgtacaaataaccaagttcatcttttaaacatgcctaacatg
gaggtcctgaaaaccgttgctggaattaagctacctattgcttccgcggacttgagtcga
cgagatgtgtgtggatttgattccactaatggccttgttgctataccaacacaagattac
tgcatacaattctataatttgtttgagaacactgaggtttcagaggtgcaagtgtgtgag
aggaactttcagcctgttgacgatattacgttgtacatctctttagtttccttgtccatt
ggtggcaatttaatgtgcactgtggaggtcaagcttcctgaagaagaattaggtggcctt
gttacactgaaattttggaaccaagggtctcgtgctggacaatttcatctgtccactgtc
atttatgagcctcacagtgatgctgggatttctgccgttgctttccatccaggaaagaac
atggctgtgagttcttcgtttggtggcaacttcaaggtgtgggtccaaagtttgtcttta
caatcaagtgacggaaaaagtcaatctggttggagatgccaatcagttggctcatacaag
aagaaacctatgacagccgcagccttctcaggcgatggatctgttcttgcggttgcagct
gagagcgtcattactctgtgggaccctgataataatgcacttgttggcgtgattgcagaa
gcactatcgcccattacaaaactttctttcgctggggattcggcttatttgatgtctcta
tctcagagttcaaaaccacaggttgctgtgtggaatgtgtcaaatctttccatggaatgg
tcttacacccttttcgcagaagctgcatgttgttcttcaagtaagagtgaatttgcggtt
ctttctcttctaagctgtcctgaaggaggagcaccagcagagcaggatgggataatactg
attttcgatgcagaaaattcaaaaccggtttcctcctggtctgtaaagaaggcaaaagga
ggtagcattgcttttgtgaaggatggtccctctttcgacgcaagcacagacggcacaaga
ggtggagaggcttcattgctggtttacgtaaatggttcacatgaatatgttatctttgat
cccctaaagaacgaggagccgcaaatcagcaagagcacacggaaaaacattcaagctgat
gaacctgcaccaatcggttatgcttctatttatggagaacttccaaaactggaactgaag
aaagaggtttcagatatcccatttatcccatcagacagaccctgggaaactatattcact
ggatcatctcatgctctcccgcctctcacgaaactgtgttctgttttcttggcatcattg
ctggagaagagaccggttacagacgagtga
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