Triticum dicoccoides (wild emmer wheat): 119299529
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Entry
119299529 CDS
T07278
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119299529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119299529
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119299529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_KDM3B
Agenet
LBR_tudor
Myc_N
Motif
Other DBs
NCBI-GeneID:
119299529
NCBI-ProteinID:
XP_037432630
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Position
5A:361974803..361986112
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AA seq
1263 aa
AA seq
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PAASIPKPAAEPSPSPLNPKARKPPLAVPSPPPPKPSPPPQPQQEKKHDAAAAPAGEAVG
RRLRVYWPLDDAWYEGTVDAYDGGSRRHRVKYDDGEEEEVDLVKEKFEWAAEEATPPPAR
KLRRLRRMSDTAKAKSPSAQEHEETGDSTEDEDWKKDAAPEDDSDGEEVELDDEEEEVVA
VSSRKGKSRNSLSTSASVSTVRSTSGLGSASSGSTLSKKRKQVDVGALDCAKKFSFQLAN
TPEKAEMKVPPSCDTRERILENAHLALTGDLSERFGSRQMEKFTFLGQGRKDAKGRRPAD
PAYDPRTLFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGAKELD
LQYMKGDQPHCGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLELRRRETGTKDKVVRR
EICAMVTKGTLTEGESLLANPDTSYILSVAESYPCNSTKSQDGHTIGVCIIDVSTSKFII
GQFQDDPERHVLCSILSEIRPVEIIKPAKMLSAETERALKNNTRDPLINALLPSTEFWDA
EKTIQVIEQYYSSSDNLTASRNTVGVQNNVGCLPDLLSELIEAGDRAYALSALGGSLFYL
KQVLLDDKLLPCAEFEPLTCSGLINNMRKHMILDAAALENLEILENATGGLSGTLYEQLN
HCVTGFGKRLLKRWIVRPLYDCKAILQRQGAIAIFKGVGHECAMQFRKDLCRLPDMERLL
AHLFSRCGENGRSKSVVLYEDTAKRLLQQFTAALRGCQQMFQACSSIRALTGTEGSSLLN
DLLSPGKGLPDVSSVLDYFRDAFDWSEADHNGRIIPLEGCDPEYDATSCAIEEIESSLQE
YLKEQRKLLRDSSVKYVNVGKDTYLIEVSESLRGSVPSDYELQSTKKGVCRYWTPEVKQL
ISELSKVATDKESILKGILQKLIQRFIEHHSKWRQLVSVSAEIDVLVSLSIAGDYFEGPT
CCPTIRELCGPDDTPTFHARNLGHPIIRSDSLSMGSFVPNNINMGGPGNASFIVLTGPNM
GGKSTLLRQVCLTIILAQIGANVPAENLELSLVDRIFVRMGARDHIMAGKSTFLVELMET
ASVLSSATKNSLVALDELGRGTSTSDGQAIAASVLDYLVHRVQCLGLFSTHYHKLAVEHE
DGKVSLCHMACQVGTGEGGLEEVTFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKS
IDFEANYGKRRCATKDKAICTQEDNFATIKDLFCVVKAGNHQEDQATSLSRIREVQMRAR
EIA
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
cccgccgcctccatccctaagcccgccgcagaaccctccccgtcgccgctgaaccctaag
gcgaggaagccccctctcgccgtgccctcccctcccccaccaaagccgtctccgccgccg
cagccgcagcaggagaagaagcatgatgcagcggcggcgcctgcgggagaggcggtgggg
cggcggctgcgggtgtactggccgctggacgacgcgtggtacgagggcacggtggatgcc
tacgacgggggctcccgccggcaccgcgtgaagtacgacgacggggaggaggaggaggtc
gacctcgtcaaggagaaattcgagtgggccgccgaggaggcgacgccgcccccggccagg
aagctgcgacgtcttcggaggatgtctgacaccgcaaaggcgaagtcgccgtctgcgcag
gagcatgaggaaactggggattccactgaggacgaggactggaagaaggatgctgctccg
gaggatgattctgatggggaggaggtggagttggatgacgaagaggaagaggttgttgcg
gtcagttcgcgaaaggggaaatcaaggaactccttgtccacgtcagcttcagtgtccaca
gtgcggtcaacgtctggtcttggctcagcatcatcagggtcaacgttgtcaaagaagagg
aaacaagtggatgttggtgcattggattgtgctaagaagttcagctttcaactagctaac
acccctgaaaaggctgaaatgaaggtgccaccgagctgtgatacgagagagaggatttta
gagaatgctcaccttgctcttactggagacctgtctgagcgctttggaagtcggcagatg
gagaagttcacattccttgggcaggggcgcaaagatgcaaaagggagacgacctgcagac
ccagcctatgatccaagaactctcttcttgcctccccagttcttgaagaacttgacaggt
ggacagaggcaatggtgggaatttaaatcccagcacatggataaggtcctgttcttcaag
atgggcaaattctatgaattgtacgagatggatgctcatgttggggccaaggagcttgat
cttcaatacatgaagggtgaccaacctcactgtggcttcccagagaagaatttagcagtg
aatttggagaaactagctcagaagggttatcgggttctggttgtagagcagaccgagacg
ccagaccagcttgaacttcgccgtagagagacgggtacaaaagacaaggttgtgaggcgt
gaaatatgtgcaatggtcacaaaaggaacactgacagaaggagaatcccttctggcgaat
ccagatacgtcatacatcttgtccgtggctgaaagttatccatgtaattcaacaaagagt
caagatggtcatacaattggtgtttgcataattgatgtttctacaagcaaattcatcatt
ggacagtttcaagatgaccctgaacgtcatgtgctatgttccattttgtctgaaatacga
cctgtggaaatcataaagccagctaagatgctgagtgcagaaactgagagggcactgaaa
aacaatacaagagaccctttgataaatgctttgcttccatctacggaattttgggatgca
gagaaaactattcaggtaatagagcaatactacagctcatcagataatctcactgcgtca
cgaaacactgttggtgtacaaaacaatgtgggctgtctgcctgacctattaagtgagcta
attgaagctggtgatcgagcgtatgcgctttctgctcttggaggttctttgttttactta
aagcaagtccttctggatgacaaattgcttccatgtgctgaatttgagcccctgacatgc
tcggggctcatcaacaatatgcggaagcatatgatacttgatgctgccgcactggaaaat
ttggagatcctagagaatgcaactggtggtctctcagggaccttgtatgaacaattgaat
cattgtgttactggatttgggaaaagattgctcaaacggtggattgtaaggcctttgtat
gattgcaaagcaatactacagcgtcaaggtgccattgctattttcaagggagtcgggcat
gaatgtgctatgcagttccgtaaagatttatgtagacttccagacatggagcgtctgctt
gcacaccttttctctagatgtggtgaaaatgggagatctaagtcagttgttctatatgaa
gacacagcaaagagactgctccagcagttcactgctgcccttcgtggttgccagcaaatg
tttcaggcatgttcttctattagggcgttgacaggcacagaggggtcttctctactaaat
gatttgctttcaccaggcaaagggttaccagatgtgtcatctgttttagattacttcagg
gatgcatttgattggtcagaggctgatcataatggtcggatcatacctcttgaaggttgt
gaccctgaatatgatgccacttcctgtgccatagaggagatcgaatccagtctacaggag
tacctgaaggagcaaagaaagctactgagggattcatcggttaagtatgtaaatgttgga
aaggatacttaccttattgaagtgtctgagagcctgaggggttctgttcctagtgactat
gagttgcagtctacaaaaaagggtgtctgccggtactggacaccagaagtaaaacaacta
atatcagaactttctaaggttgcaacggataaagaatcaatattgaaaggcattcttcag
aaactgattcaacgctttattgagcatcacagcaagtggagacagttggtgtctgtgtct
gctgagattgatgttttggttagtctttctattgcgggtgattattttgaggggccaaca
tgctgtccaactatcagagaattgtgtggtccagatgatactcctactttccatgcaaga
aatcttgggcatcccattattcgaagtgattcgttaagcatgggttcatttgtaccaaat
aacattaacatgggtgggccaggaaatgccagctttattgttcttactggtccaaatatg
ggtggtaaatcaactctcctgcgtcaagtttgtcttaccataatattggcacagattgga
gcaaatgttccggcggaaaaccttgagctttctcttgttgaccgtatctttgttcgcatg
ggagcaagggatcatattatggctggaaaaagtacattcttggtggagctcatggagact
gcttccgtgctttcgtcagctaccaagaattctcttgtggctttagatgagcttgggcgg
ggcacatcgacttctgatggacaagctattgcggcatctgttctagattatctagttcat
cgtgtgcagtgtctaggcttgttttctacccactaccataagttagcagtggaacatgag
gatggcaaggtatcactttgccatatggcatgccaagtaggcactggagaaggaggtttg
gaagaagtgactttcctttacagattaacagctggttcatgtcccaaaagctatggcgtg
aatgttgctcgattagcaggaatacctgcatcagtgcttcaaagggctaatgagaagtca
attgactttgaggctaattatgggaaacgccgctgtgcaactaaagataaggcgatctgt
acacaggaggataactttgctaccattaaggatttgttctgtgttgtgaaggcagggaat
catcaagaagatcaggcaacaagcttaagcaggattcgtgaagtacagatgcgtgccagg
gagattgcatga
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