KEGG   Triticum dicoccoides (wild emmer wheat): 119299747
Entry
119299747         CDS       T07278                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440  Homologous recombination
tdc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    119299747
   03450 Non-homologous end-joining
    119299747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdc03032]
    119299747
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119299747
DNA replication proteins [BR:tdc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    119299747
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     119299747
    BRCA1-C complex
     119299747
   NHEJ (non-homologous end-joining)
    MRX complex
     119299747
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 AAA_21 SbcC_Walker_B Rad50_zn_hook AAA_29 AAA_13 ABC_tran
Other DBs
NCBI-GeneID: 119299747
NCBI-ProteinID: XP_037432795
LinkDB
Position
5A:98518945..98541070
AA seq 1316 aa
MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR
SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI
NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDSIAQDQEKSDALKT
QMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQQQQYAALSEENED
TDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEADA
HMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSNLEDDLQEKKKTNE
TQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDAAETELSRHNLARI
DERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHREKDNIATDADDRVK
LELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNS
KSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSISKVSVDINAYPKILKD
AMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEEDLFVKKQRTTGTS
TAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQI
SDDLVSVLAQVKMDRDGVEILLRPVDTIDRHVQEIQELEPQVKDLEYKLDSRGQGVKSVD
EIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALRAEKLRASSVLLKFKK
AEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRG
FQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVELDKSKQ
LLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKE
RLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYY
AALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGTRSYSYRVVMQN
GGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHSKIEAQEIFD
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgagcacggtggacaagatgctgatcaaggggatccggagcttcgacccggagaacaag
aacgtcatcaccttcttcaagcccctcaccctcatcgtcggctccaacggagccggcaaa
accaccatcatcgagtgcctgaagctgtcctgcaccggcgagttgccccccaactcccgc
tccggccacaccttcgtccatgaccccaaggtagcaggtgaaactgaaacgaaagggcag
attaagctgcggtttaagacagcagcaggaaaggatgtggtgtgcatccgctctttccag
cttacccagaaggcatcaaagatggagtttaaggcaatcgagagcgtcctccagactata
aatccacacacgggcgagaaggtttgtctcagctacagatgcgctgatatggatagggag
attccagccctaatgggtgtttcgaaggctatattggagaatgttatatttgtgcaccaa
gacgaatccaattggccattacaggacccttcaacacttaagaaaaagtttgacgacatc
ttttctgctacccgctataccaaagctctcgaagtcataaagaaacttcacaaggaccaa
gcacaagaaatcaagacttttaggttaaagttggagaaccttcagactcttaaagatcaa
gcatacaggcttcgtgacagtattgcacaagatcaagagaagtcagacgccttaaaaact
caaatggaggacctgaaaacaaacatccaagctgtggaaaacaaaatccttcgtaccgaa
acaagtatggtggacttgaggaaacttcaggagcaaattagcaccaaagcaactgctaga
agtacatattttacacttcagcagcaacagtatgctgctctttctgaggaaaatgaagat
actgatgaggagctgaaggagtggcaaacaaaatttgaagaaaaaattgcattactggaa
acgaaaatcgctaaacttgaaagagagatgaatgatgaatatgcaaaaagctctctgcta
tctgagaccatcaatgattcaacacgtgaaataggaaagctccaggcagaagctgatgct
cacatgtccgtgaagcatgaaagagattcagccatcagaacgatattcaataaacataat
cttgggccagttcctgatgctccttttaccaatgatattgccatgaaccttacaaacaga
actaaagcaagactatcgaatctcgaggacgatttgcaggaaaagaagaaaactaacgag
acacagttagaatttctttggggacgttatcttaaagtaaatgctcgctactctgaagtt
gatgggcagatacagtctaagaaggaatctaagataggtgttttaaggcgcataaaggat
aaagagaatgagcgagatgctgcagagacggagctttcaaggcataatctggcccgtatt
gatgaaagagagcggcatctgcaaattgaagttgagaggaagacaattgcgctgggagaa
agagactatgatttgattataagtcagaagcgctcagagatatataccttggatcacaag
ataaaagcacttcaccgagagaaagataacatagcaactgatgctgatgacagagtaaaa
ttagaactcaagaaggatgagttggagaagtgcaagaagaaacttaaaaagatatatgat
gaacataaggataaatttagaagtgtccttaagggaaggcttcctcatgagaaggatgtc
aagaaggagattactcaagctttcgggtctgtagactcagaatacaatgatttgaactca
aaatctcaggaagcggaacaacagttgaaattggcacaaatgaaaattgatgctgctaaa
agccacttgtcaaagctccaaaaagttttggatgcaaaaagaaagcatctgaactcgaaa
cttcaatccatttctaaggtatctgttgacatcaacgcttaccccaagattctgaaagat
gccatggacgagagagataaacagacaaataatttcagttatgctaagggaatgcgccaa
atgtatgaaccttttgaaaaagtggcccgccagcatcacaagtgtccttgctgtgatcgt
gctttcacacctgatgaagaggacctctttgtaaagaagcaaaggacaacaggtacaagt
accgcagagcgcttgaaagtgctggcagagaacttatcagttgctgaagacttattcaat
caattggataatctccgtgtgatttatgatgaatatgtgaaactggagaaagagactata
cctttagcagagaaggatttggaacaactttcggcagataaaagtgagaaggaacagata
tctgatgatcttgtgagtgttcttgctcaagttaaaatggacagggatggagtggaaatc
ttgttacgtccagttgatactattgacaggcatgtgcaagaaatacaggagttagaacca
caagtcaaagatcttgaatataagcttgattctcgtggccaaggtgttaaatctgtcgac
gaaattcagttggagctgatctctgtgcagagggcaagggacacattgactggtgaagta
gacgatctcagggatcagcaaaaaatgcttagcgaggatctatcaaatgctcagatgcgg
tggcatgctcttagggcagaaaaactaagagcttcaagtgtattgctgaagttcaaaaag
gctgaagaagatttggtacattttgccgaggaaaaggagcaactgatcctagatcagaag
catttagaagaagctcttgttccattgtcaaaagagagagaaagcttgttgcaagaatat
aaagctttgaaggaaaggtttgatcaggagtatgatcagctggcagaaagaaaaagggga
ttccagcaagaaatcgatgtacttggaacccttaacacacgcatcaaagggtacctggat
tcaaacaaagtagagaagcttaatgagttgcaggaaaggcataccctatccctgtctcag
ttacagaaatgtgaggcaagaaagcaagacatctcggttgagcttgacaagagcaaacag
ctattacggagccaagatcaattgaaaagaaacattgatgacaatctgaactacaggaaa
acaaaggctgaagtggatcgacttactcatgatatcgagttacttgaagataatgtgctt
tccatcggcagcatgtctactatagaagctgatcttaagcggcatgctcaagaaaaggag
aggcttctttcagagtataataggtgtcaaggaacaatttctgtttaccaaagtaatatt
tcaaagcacaaacttgaacttaaacagacacaatacaaggatattgagaagagatatttt
aaccaacttcttcaactaaagacaactgagatggcaaataaggacttggaccgatactat
gctgctttggacaaggctcttatgcggttccataccatgaaaatggaggagataaataaa
ataattaaggaattgtggcagcagacatacagaggccaagatattgattgcataagcatc
aattctgattctgagggtgcaggcactcgatcatatagctaccgtgttgtcatgcaaaat
ggtggtgctgagctggaaatgcgagggcgatgcagtgctggtcagaaggtgcttgcttct
cttataatcagactcgcactggcagagacattctgtctgaattgtggcatattagctctg
gatgagccaaccaccaatcttgatggaccgaatgctgagagcctagctgctgccctattg
agaataatggagagtaggaaaggccaggagaacttccagctgattataatcacccacgat
gagcggtttgctcagcttattggtcagaggcaacttgccgagaagtattaccgaatctcc
aaggatgagcagcaacacagcaaaatagaagcccaagagatatttgactga

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