KEGG   Triticum dicoccoides (wild emmer wheat): 119300041
Entry
119300041         CDS       T07278                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083  Polycomb repressive complex
tdc04120  Ubiquitin mediated proteolysis
tdc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119300041
   04120 Ubiquitin mediated proteolysis
    119300041
  09126 Chromosome
   03083 Polycomb repressive complex
    119300041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tdc04131]
    119300041
   04121 Ubiquitin system [BR:tdc04121]
    119300041
   03036 Chromosome and associated proteins [BR:tdc03036]
    119300041
Membrane trafficking [BR:tdc04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    119300041
Ubiquitin system [BR:tdc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     119300041
   Cul7 complex
     119300041
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     119300041
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     119300041
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 119300041
NCBI-ProteinID: XP_037433021
LinkDB
Position
5A:576887439..576908959
AA seq 169 aa
MTTKMVRLRSSDGQELEVMEEAIAAASKTIKDTLEKGGAADGAIPVPGVIGRVLSRVLEY
VNRHFSDPGAAADPFDHIPNFDDPFKAFDALVQNREDAFVQVDQDTLFDLIHAAECLDIE
GLMDLTCETVADQMRGKTIEEIRKKFHVVNDYTAREEEDVRKENAWAFE
NT seq 510 nt   +upstreamnt  +downstreamnt
atgacgacgaagatggtccgcctgcgcagctccgacggccaggagctcgaggtgatggag
gaggcgatcgccgccgcgtctaagacgatcaaggacacgctggagaagggcggcgccgcc
gacggtgccatcccggtccccggcgtcatcggccgggtcctctcccgcgtcctcgagtac
gtcaacaggcacttctccgacccgggcgcggcagcggaccccttcgaccacatccccaac
ttcgacgacccgttcaaggcgttcgacgcactagtgcagaaccgtgaggacgccttcgtc
caagtcgaccaagacacgctcttcgacctcatccacgcggccgagtgcctcgacattgag
gggctgatggacctgacgtgcgagacggtggcggaccagatgaggggcaagaccatcgag
gagatccgcaaaaagttccacgtcgtcaacgactacaccgcacgggaggaagaggacgtc
cgcaaggagaacgcctgggcgttcgagtag

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