KEGG   Triticum dicoccoides (wild emmer wheat): 119300416
Entry
119300416         CDS       T07278                                 
Name
(RefSeq) protein RTF1 homolog
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119300416
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     119300416
SSDB
Motif
Pfam: Plus-3
Other DBs
NCBI-GeneID: 119300416
NCBI-ProteinID: XP_037433280
LinkDB
Position
5A:141513085..141515624
AA seq 660 aa
MPDPNLDDLLLQAAGRTVGKGGQSRQSNQRWQQHGRRAGGSYSGGSGSDGSDDGDSDSDV
APSHPRKRLPPGSQVPLKKRHQTGKGGGRGGGGYDDEDPDDEGRRSGGEDSDSAPSVGSD
LYKDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKADKARKDSPPPPPSR
LRASARTDRSATKSALDELRAKRMRQQDPEGYRSRFKDLVPKSGGSPNRRRAGTPPSDGS
NDGGNRGRMNDHVGIAEDNRDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFED
LVSGCFVRLGIGKTKSGTPKYRLCIVRNVDANDPDRQYKLESYETCKYLNVVWDNEANAA
RWQMTQVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIIEAYNFVYSAATVQRM
LKEKSAVRRPMNVAAEKDRLRDQLEMALVRRDDAEAERIRARLNHLQKIAQPMSTNEKAA
KLEEMNRKNRAENFKNASEMKAVNTSLKAGEAGYDPFSRRWTRSRNYYAAKPEGEAENAE
AANGNSDNVIAVTEAVKGGVRVGTAVTASALVAAAEAGKLVDTNAPLDLGTETNPLHNFE
LPISLAVLKQYGGPKGQFEAYMARKQKIEATMGYKIPDNDGRRHALTLSVSDYKRRRGLL
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgccggaccctaacctggacgatctgcttctccaggccgcgggtcggaccgtggggaag
ggcggccagtcccggcagtcgaaccagcgctggcagcagcacgggcgccgcgctgggggc
tcctactccggcgggagcggctccgatggctccgacgacggcgactccgactcggacgtc
gcgccgagccacccgaggaagaggctgccgccgggctcgcaggtgccgctcaagaagagg
caccagacggggaagggcggcggccggggaggaggagggtacgacgacgaggaccctgat
gacgaggggaggcggagcgggggtgaggactccgacagcgcgccgtccgtcgggagcgac
ctgtacaaggacgaggacgacaaggagcagctggagaacatgacggagctgcagagggag
atgatcctggcggagcggagcaccaggatcgacgactacaagctcaagaagctggcacgg
gcgtcctcgtccaaggcggataaggcccggaaggacagccctcccccaccgcccagccgg
ctgcgggcctcggcccggactgacaggtctgccaccaagagcgcactcgacgagctgcga
gccaagaggatgaggcagcaggatccggaagggtaccgtagcaggttcaaggatctggtt
cccaagagtggcggctcgcctaatagacgcagggctggaacccccccgagcgatggcagc
aatgatggcggtaacagggggaggatgaacgaccatgttgggattgctgaggataatcgg
gatgatgagtttgacgaatcaccaagtagacttgaccctctcaagtttgatgatgtgaag
agcataacccttcggaggtcaaagctggtgaagtggttcatggaacccttttttgaggac
cttgtatctggttgctttgtgcggcttgggattggcaagacaaaatcaggcacccccaag
tacaggctgtgcatagttagaaacgtggatgctaacgacccagatcggcagtacaaactg
gagagttacgaaacatgcaagtatctcaatgttgtatgggataatgaagctaatgctgct
cggtggcagatgactcaggtctccgactctcctgtccttgaagaagagttcaaggagtgg
cttcaagaggctgaaaagaatggcgtacgcataccaacccggcaggaagtgctggagaag
aaagaagccattatagaggcctacaattttgtgtattcagcagctactgtacagcggatg
ctgaaagagaaatcagctgtgagacgtcctatgaatgttgctgctgagaaggataggttg
agggatcagttggagatggccctggtccggagggatgatgcagaagcagaaaggatccgt
gcaaggctgaatcatctgcagaagattgctcagccaatgtcaactaatgagaaggcagca
aagttagaggagatgaacaggaagaaccgtgctgagaatttcaagaatgcatcagaaatg
aaagctgttaatacaagtttgaaggctggagaggctggttatgatcctttctcaaggagg
tggacaagatcgaggaactattatgcagcaaagccagaaggagaagcagaaaatgctgaa
gccgctaatggcaacagcgataatgtaatagctgtgacggaagctgtgaagggtggggtg
cgagttggtacagcagtcacagcttcagctctagtagcagctgctgaagctgggaagctg
gttgataccaacgcacctttggatctcgggacagaaacgaatccgctacataattttgaa
cttcctatatcattggctgttctgaagcagtatggtggacccaaaggtcagtttgaggcc
tacatggcgaggaagcagaagatagaagcaacgatgggttacaaaatccctgacaatgat
ggaaggaggcatgctctaactctgtctgtgagcgactacaaaaggcgacgtggtcttctt
tga

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