Triticum dicoccoides (wild emmer wheat): 119300766
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Entry
119300766 CDS
T07278
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119300766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119300766
03036 Chromosome and associated proteins [BR:
tdc03036
]
119300766
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119300766
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119300766
PBAF complex
119300766
GBAF(ncBAF) complex
119300766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
119300766
NCBI-ProteinID:
XP_037433555
LinkDB
All DBs
Position
5A:complement(226773040..226785745)
Genome browser
AA seq
785 aa
AA seq
DB search
MPRKASSSSDAKLKWRKRKRSQDTSPSKQSGGADHSDDSDSAAANDEDDALHGSANGGET
LGARGGDDDTVPDLREAEVLSSAEPVSGFPSATRRTISRLHPSVLAVIAADRALAAGASC
ASAPPAPALENISHGQLQVLAAMLPDHPSLSNDPDKPSSYVCTVPPLMECQGVPKQFYSK
LLVVPRHADWFSPATVHRLERQVVPHFFSGKSPGHTPEKYIMLRNKVIVKYLERPSRRLA
FAECQGLVTSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRLASSLIREEQTGELQLA
SAPLKSIDGLILFDRPKCSARAEDIASVASTSSALEVPNGDTGFADLDEKIWERLSENFC
SYCSQPLPSLHYESQKEADIALCLDCFHDARFVPGHSSLDFERVDGTKDGSDNDGDSWTH
EETLLLLEGLEKYNDNWNAIAEHVGTKSKAQCIHHFICIPVEDGLLESIEVPEASVSSRV
QSNGFSYSNSNGGISGSVPQSSQPGQQLPFVNSANPVMSLVAFLASAVGPRIAASCANAA
LSVLTRDDSRMCSEGNDVMGQAARPNYDASSSVSPENVKCAAMCGLSAAATKCKLFADQE
EREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARFA
SSGGPMPGGSSSTMASNPMSQASPRSPAMPGSMPPASMQAFYSNNMQGHPAQMAFLQQQQ
RQQQQQQQQMLSFGPRLPLSAIHPGSSSSAAPSVMFNPGMPSSATPNHHSMLRPPPSGSN
NSSFG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggcctcgtcctcctcagatgcgaagctcaagtggcggaagcggaagcgc
tcacaggacacctccccatcgaagcagtccggcggggccgaccactccgacgactctgac
tccgcagcggcgaacgacgaagacgacgcgctccacggctccgccaacgggggcgaaacc
ctaggcgcccgtggcggtgatgacgacaccgtgcccgacctccgggaggcggaggtgctc
tcctcagcggagcccgtctctggcttcccctcggctacccgccgcactatcagccggctc
catccctctgtgcttgcagttatcgccgctgatcgtgccttggcggctggtgccagctgt
gcttcggctccgcctgcacccgcgctggagaacatttcgcacgggcagctccaggtgcta
gcagccatgctccctgaccacccatccctgtccaacgaccctgacaagccgtcctcctat
gtctgcaccgtgcctccactcatggaatgccaaggcgtgcccaagcagttctacagcaag
ttactcgtcgtccccagacacgcagattggttctcgccggcgactgtacacaggttggag
aggcaggtggtgccacatttcttctcagggaagtccccagggcatacaccagagaagtac
ataatgctgaggaataaggtgattgtgaagtatttggagcgcccgtcaaggagacttgca
tttgctgagtgccaggggcttgttacaagcacggctgaattgtatgacctgagtcggata
gtcaggttcttggacacttgggggattattaattacctcgcggctggatctgtgcaccgg
ggcttgaggctggcatcatctttaatcagggaggagcaaacaggggagctgcagctggcg
tctgcaccattgaagtcaattgatggtctgattttgtttgatcggccaaaatgcagtgcc
cgagcagaggatatcgcttctgtggcatcaacttcgtctgctctggaggtgccaaatggt
gatactggctttgcagacttggacgaaaagatttgggagaggctgtctgagaacttctgt
agttattgttcacaacctttgcccagtttgcactatgaatcacaaaaggaggcagacatt
gctctttgcttggattgcttccatgatgcaagatttgttcctgggcactcaagcttagat
tttgagagagtggatggaacgaaagatggatcagacaatgatggggacagctggactcac
gaggaaactttactgttgctggagggcttagagaagtacaatgataactggaatgctatt
gctgaacatgtcggaacaaagtctaaggcgcaatgtattcaccattttatttgtattcca
gtggaagatggtctgttagagagcattgaagtaccagaagcatctgtttcatctagagta
caaagcaatggcttttcatattcaaattccaatggcggcatttcaggtagcgttcctcaa
agtagccaacctggacaacagcttccatttgttaattccgctaatccagtcatgtcactg
gttgcatttttggcctctgcagtaggaccaagaatagcagcatcctgtgcaaatgcagca
ctatctgttttgacaagagatgattccaggatgtgttcagaaggcaatgatgtcatgggt
caagctgctcgtccaaactatgatgcctcatcatccgtctctcccgaaaacgtcaaatgc
gctgcaatgtgtggcttgtcagcagcggcaacaaagtgcaaactctttgcagatcaggag
gagcgtgaaattcagagattagcggccaccatcataaatcaccagttaaagagattggag
ttgaagctgaagcaatttgcagaggtggagaccttgcttttgaaggaaagcgagcaggtt
gagagggccaggcagaatcttacagcccagcgtgtccggtttatgtcggctcgatttgct
tcctccggaggtcccatgcccggaggcagcagcagcaccatggcatcaaatccaatgagt
caagccagccctcgatcaccagcaatgccaggctcaatgccaccggccagcatgcaagcg
ttttacagcaataacatgcaggggcatccagcccagatggctttcttgcagcagcaacag
cggcaacaacagcagcagcagcagcagatgctctcatttgggccgcgcctgccgctctca
gctatccatcccggctcatcgtcatcagcagcacccagcgtcatgttcaacccgggcatg
cccagttcggctacccctaaccatcactccatgctgagaccaccaccctcagggagcaac
aattcaagttttggttaa
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