Triticum dicoccoides (wild emmer wheat): 119300767
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Entry
119300767 CDS
T07278
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03410
Base excision repair
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119300767
03410 Base excision repair
119300767
03420 Nucleotide excision repair
119300767
03430 Mismatch repair
119300767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119300767
03036 Chromosome and associated proteins [BR:
tdc03036
]
119300767
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119300767
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119300767
DNA Replication Termination Factors
ELG1-RFC complex
119300767
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119300767
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119300767
Check point factors
HRAD17(Rad24)-RFC complex
119300767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_14
AAA_5
AAA_assoc_2
AAA_11
ResIII
AAA_24
SLFN-g3_helicase
AAA_2
nSTAND3
PhoH
DNAX_ATPase_lid
AAA_23
AAA_30
AAA_19
AAA_28
AAA_25
AAA_7
IstB_IS21
DUF3853
Cdc6_lid
RNA_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
119300767
NCBI-ProteinID:
XP_037433556
LinkDB
All DBs
Position
5A:complement(226963178..226974887)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSSDLISVSGAIP
EDIVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICR
KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQGLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcgtcacaaccatgggtggagaaataccggccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtggtccgtgtgctcaccaacaccctcgagaccgcc
gacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctc
gccattgcctatcagctctacggtccagagctctacaagtcaagagttttggagcttaat
gccagtgatgaacggggaattaatgtggtgaggacaaagatcaaggattttgctgctgtg
gctgttggttctgcacggaaaggtggttatccctgcccaccatacaagattattatacta
gacgaagcagattcgatgacagaagatgcccagaatgcattgaggcgtactatggagact
tactccaaagtgacaagattcttttttatatgcaattatatcagcaggataatagagcca
cttgcatcaagatgtgcaaagtttaggttcaagcctctttcagaagatgtgatgagcaac
cgcattttgcatatatgcaatgaagaagggctcactctggatgctcaggcgctatccaca
ttaagtgccatctctcaaggagatcttcgtcgtgctataacttatcttcagagtgcagct
cgcttatttggatcttctatttcttccagcgacctgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgcttgtagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaatattattgctgacggatatccagtttcccagctgctctcgcagttt
ctagatgtgattgttaatgcggatgatattccagatgagcacaaggcaagaatatgtaga
aagcttggggaagctgataagtgcttggtcgatggggcagatgagtatttacagctctta
gatatggccagtgagacgattcgtgctctatttaacatcccgcaagggctggtcttctaa
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integrated database retrieval system