KEGG   Triticum dicoccoides (wild emmer wheat): 119300767
Entry
119300767         CDS       T07278                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030  DNA replication
tdc03410  Base excision repair
tdc03420  Nucleotide excision repair
tdc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119300767
   03410 Base excision repair
    119300767
   03420 Nucleotide excision repair
    119300767
   03430 Mismatch repair
    119300767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdc03032]
    119300767
   03036 Chromosome and associated proteins [BR:tdc03036]
    119300767
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119300767
DNA replication proteins [BR:tdc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119300767
  DNA Replication Termination Factors
   ELG1-RFC complex
    119300767
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    119300767
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119300767
  Check point factors
   HRAD17(Rad24)-RFC complex
    119300767
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N Mg_chelatase AAA_16 AAA_14 AAA_5 AAA_assoc_2 AAA_11 ResIII AAA_24 SLFN-g3_helicase AAA_2 nSTAND3 PhoH DNAX_ATPase_lid AAA_23 AAA_30 AAA_19 AAA_28 AAA_25 AAA_7 IstB_IS21 DUF3853 Cdc6_lid RNA_helicase Parvo_NS1
Other DBs
NCBI-GeneID: 119300767
NCBI-ProteinID: XP_037433556
LinkDB
Position
5A:complement(226963178..226974887)
AA seq 339 aa
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSSDLISVSGAIP
EDIVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICR
KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQGLVF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccgctcgtgccgtcgtcacaaccatgggtggagaaataccggccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtggtccgtgtgctcaccaacaccctcgagaccgcc
gacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctc
gccattgcctatcagctctacggtccagagctctacaagtcaagagttttggagcttaat
gccagtgatgaacggggaattaatgtggtgaggacaaagatcaaggattttgctgctgtg
gctgttggttctgcacggaaaggtggttatccctgcccaccatacaagattattatacta
gacgaagcagattcgatgacagaagatgcccagaatgcattgaggcgtactatggagact
tactccaaagtgacaagattcttttttatatgcaattatatcagcaggataatagagcca
cttgcatcaagatgtgcaaagtttaggttcaagcctctttcagaagatgtgatgagcaac
cgcattttgcatatatgcaatgaagaagggctcactctggatgctcaggcgctatccaca
ttaagtgccatctctcaaggagatcttcgtcgtgctataacttatcttcagagtgcagct
cgcttatttggatcttctatttcttccagcgacctgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgcttgtagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaatattattgctgacggatatccagtttcccagctgctctcgcagttt
ctagatgtgattgttaatgcggatgatattccagatgagcacaaggcaagaatatgtaga
aagcttggggaagctgataagtgcttggtcgatggggcagatgagtatttacagctctta
gatatggccagtgagacgattcgtgctctatttaacatcccgcaagggctggtcttctaa

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