Triticum dicoccoides (wild emmer wheat): 119300780
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Entry
119300780 CDS
T07278
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119300780
Enzymes [BR:
tdc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
119300780
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119300780
Prokaryotic type
119300780
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
119300780
NCBI-ProteinID:
XP_037433564
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All DBs
Position
5A:233333984..233343254
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AA seq
388 aa
AA seq
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MSAASSDSAEIATASKRPFDPYLADPSPPSKLQRFSQSNISPADADSGGEAGAESEAMAG
ARLSRTQRYLVAVEYDGTRFSGSQQQPNQRTVVGVLKEAFHKFIGQPVSIFCSSRTDAGV
HALSNVCHVDVERISKRKPGEVLPPHDPEVVKCAVNHFLHKNEGDIMVTDVRCVAPDFHA
RYKALERTYHYRLLSGPERPSIFEKNSAWHIPEDLNIQAMKKACNILVGHHDFSSFRAFG
CQAKSPVRTLDELTVTEVFPVMFFPSSLERSEMESPDGSLVYSRASLMGSSGEGSDVSST
TSGKSVCENGQEFGKRLRHRCFVVTARAQSFLYHQVRLMVGLLKAVGIGDLTTADVERIL
DAKTMTAAPPMAPAYGLYLDNVKYDPTV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccagctcggactccgctgaaatcgccactgcctccaaacgcccgttcgat
ccctaccttgccgacccgtcgccgccttccaaactccagcggttctcccagtcaaacatc
tcgccggcggacgcagacagcggcggagaggcgggcgccgaaagcgaggcgatggccggc
gcgcggctctcccggacgcagcgatacctggtcgccgtggagtacgatggcacccgcttc
tctggttcccagcagcagccgaaccagcgcaccgtcgtaggcgtcctcaaggaggcattt
cacaaattcattgggcagccagtctcaatcttctgttctagtcgaacggatgcaggtgtt
catgctttgtcaaatgtttgtcatgttgatgtggagcgcataagtaaaaggaagcctggt
gaagtgttgccacctcatgaccctgaagttgtaaaatgcgcggtgaaccattttttacat
aagaatgaaggtgacataatggtgactgatgttcgttgtgttgcaccagatttccatgct
agatacaaagctctagagcgcacatatcactatcgtttactttctgggcctgagcgaccg
tcaatctttgagaaaaactcggcttggcacatacctgaggatctaaatatacaagctatg
aagaaagcatgcaatatacttgttgggcatcatgatttcagttcatttcgagcatttgga
tgtcaggcaaaatctccagtgagaactttggatgagcttactgttacagaagtatttcct
gtcatgttttttccttcaagcttagagcgatcagagatggaatcaccagatgggtctctt
gtttattcaagggcatcactcatgggatcttctggagaaggatctgatgtttctagtact
actagtgggaaatcagtatgcgagaatgggcaagagtttggaaagagattaaggcaccgc
tgctttgttgttactgcaagggcacagtctttcctttaccaccaggtaagattgatggtc
ggtcttctgaaagctgttggaataggagatctaacaactgctgatgtggagagaattctg
gatgcaaagacaatgactgctgcacctcctatggcacctgcttacgggctttaccttgac
aacgtgaaatatgacccgactgtttaa
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