Triticum dicoccoides (wild emmer wheat): 119301095
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Entry
119301095 CDS
T07278
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119301095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119301095
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119301095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP_TPR_like
RVE6
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
119301095
NCBI-ProteinID:
XP_037433886
LinkDB
All DBs
Position
5A:292770635..292777658
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AA seq
819 aa
AA seq
DB search
MEPAAPKEAPPPQPQPGVEEDGTLSATAAMARDAAVLFQSRRYAECADVLAQLLLKKEGD
PKVLHNMAIAESFVDGCPDPKKLLEILGNVKIRSDELACASREQADSANGVGNNTSSEPR
GSGIAPLISAAHNATAYGDEFDTTIITFNTALILHHLHDYESALSVLEPLYRNIEPIDET
TALHVCFLLLDITLALQDASKAADVIQYLERSFGVANTGNQNEIASTVQQQPAQLKPAKS
NTPPDSDSNTCPGGSEILSVGSFSDDTLEFESFYSTLDGGNHLGRPILNEFSRASADLAA
TAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNYR
KAVKLLSTPNNRTEPVMLTMFYNNLGCILHQQRSNHTSVLCFSKALKYSLSLRSEKPLKL
SALSQDKSCLISYNCGIQHLMCGKPLLAARCFREAMPLLYHRPLFWLRFAECSLLALEMG
FLTASGATSCKDEIEIYVVGSGKWRHLVISPVNSGSHLSDFGSSGEHGNLISLRFARQCL
LNAQLLMDASEQKKMAISDTECNQGSQCQKSSGQSTMSVESKVHSGPTTNANGEQKGAAS
LNATLQSSLAMYDDIIRKENLKIRQAILGDLAFVELCLENPLKALSIANSLLQVPDCSRM
YLFLGHVYAAEALCLLNRLKEAVDQLTVYLRDDNAIELPYSVENREKAPVEKDSDGEDSV
TPAMTKLTSEESQHSMSLKPEEACGVLYVDLGMTAAVQGELEQANYLVSRGFAMLPNSPR
ALLASIYVDLLQGKAQEAIGKLRRCRNVRFKTSSVAASR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcggcgccgaaggaggcgccgccgccccagccacagcccggggtggaggag
gacgggacgctctccgcgacggcagctatggcaagggacgccgccgtgctgttccagagc
cgccggtacgccgagtgcgccgatgtgctcgcgcagctcctgctcaagaaggagggtgac
cccaaggtccttcataatatggctatcgcagaatcgtttgtggatggttgtcctgatcca
aaaaagttgcttgagattcttggcaatgttaagataagaagcgatgaacttgcctgtgca
tctagagaacaagctgattctgccaatggggtagggaacaatacttcttctgaaccaaga
ggcagtggcattgcaccgttgatttctgctgcacataatgcaacagcctatggagatgag
tttgacacaaccataataacattcaacactgctcttatccttcatcatcttcatgattat
gaatctgcactgtctgttttggagccattgtaccgaaatattgaacctattgatgagaca
actgctcttcatgtatgttttctgttattggatattacattagctttgcaagatgcatca
aaagccgcggatgtcattcagtacttggaaagatcatttggagtagctaatacagggaac
cagaatgaaattgctagcacagttcagcagcaacctgctcaactgaaacctgcaaaaagt
aacacgcctccagattctgattcaaatacttgtcctggtggatctgagattctttcagtt
ggaagtttttcggatgatacactggagtttgaatctttttactctactctggatggtgga
aatcacttgggcaggcctatcttaaatgagttctcgagggcatcagctgatcttgctgcc
acagctgctgatttgaaagttagactacaaatttacaaggtccggcttctacttctcaca
aggaacctgaaggttgccaagcgagaactcaaagttctaatgaacatggctcgtggtagg
gattcatctacagagcttctcttgaaatctcagctagagtatgcccgaggaaattatcgg
aaggctgtgaagcttttgagcacccccaataatcggactgaaccagtaatgctaaccatg
ttctacaacaatcttggttgtatactccatcagcagagatccaaccatacatcagtattg
tgcttcagcaaagcactgaaatacagcttatctcttcgctcagagaaaccattgaagctg
tctgcactatcacaagacaaatcttgtctgatatcatacaactgtgggatccaacatttg
atgtgtggtaaaccactgttagcagctcgttgttttcgtgaggccatgccgctcttgtac
catcggcccctcttttggctccgttttgctgagtgtagcctgctagctctagaaatgggc
ttcctcactgcaagcggtgctacttcatgcaaagatgagattgaaatttatgttgtgggg
tcagggaaatggcgccatttagttatcagtccggtgaactcaggaagtcatttatcagat
tttgggagttcaggtgaacatggaaatttgatatcactcagatttgctagacagtgtcta
ctcaacgcccaactattaatggatgcttctgagcagaaaaaaatggcgatttcagataca
gagtgcaaccaagggtcacaatgccagaaaagttcaggccagagcacaatgagtgtggaa
tccaaagtccactctggtccaacaactaatgcaaatggagaacaaaagggagccgcgagc
ttgaatgccactttgcagagctctcttgctatgtatgatgacatcattagaaaagagaac
ctgaaaattcgacaagccatcctgggggacctggcgttcgtcgaattgtgtcttgagaat
cccttgaaagctttgtctattgccaactcactgttgcaggttccagactgctccaggatg
tacttattccttggccatgtatatgcagctgaagctttatgtttgctgaacaggctaaag
gaggctgttgatcagttaactgtttatttgagagatgacaatgctattgagttgccctac
agtgttgagaatcgtgaaaaggcccctgttgagaaagacagcgatggcgaggattcagtc
actcctgccatgacaaaacttacctcagaagaatctcagcactcaatgtctctcaagccc
gaggaagcctgtggggttctgtatgttgaccttggcatgactgctgcagtgcagggagag
cttgagcaggccaactacctggtgagccgtggttttgcaatgttgcccaacagccctagg
gcactgctagcatccatctatgtggatcttctgcaggggaaggcgcaagaagctattggc
aagttgagaaggtgcagaaacgtgagatttaagaccagtagtgtagcagccagcagataa
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