Triticum dicoccoides (wild emmer wheat): 119301140
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Entry
119301140 CDS
T07278
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119301140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119301140
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119301140
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
119301140
NCBI-ProteinID:
XP_037433941
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Position
5A:complement(304097578..304101323)
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AA seq
823 aa
AA seq
DB search
MDRDRSSRRGRGEDRHATHERSDDHHRRRRHDSDGHQHHHKRDAEDDHRRRRHDDGGVEE
DRRRARRHRSHSPSESPPAAKRDRSSSRAPRDSVERRDSADREPPPPPSRKRKDHDSGGG
RRDGDEPDREGGKRPRASVEPPPRKEERPRRERRRFEDVDAYGDERGKGDKGSSSREHKK
VESGANGDSQSAAATNGGAQQPLNSAPAVAVPSANPVSSKVSSITTTNENGGVSIRSDEV
TGKSSTDGTANSSAGRSSNLSLDALAKAKKALQLKKELSEKLKRLPALNKLGTTIPDTQT
PKKETQSVSGSIASAVHAGASSELPASSVSAGISGLTNIPNLDAVKRAQELAAKMGFRQD
PQFAPLINMFPGTSSELTVPQRPAKAPVLRLDAQGREIDENGNVISMTKPSNLSTLKVNI
NKQKKDAFQIIKPDLESLAKATVHFDERMGINPTKLLRPKRPGFQFIEEGKLSRQAELQR
IKNQFGEAQAKELKVKQAQLAKAKVEVDMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSK
ILLSPTYEDISLEKLNMDKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRL
AKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDR
NIARKLTPSERREKKERKLFDDPNTLGCIVCVYRIRDLSHPQTRFKVDVNAQENRLTGAA
VITDGISVVVVEGGKKSIKRYNKLMLNRIDWAAAVGGEDDADEEPDKPVNSCVLVWQGSV
VKPTFPRFSVHQCRSEAAAKKVFADAKVPHYWDLAVNFSEDSS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccgatcttctcgccgcggccgcggcgaggaccgccacgccacccacgag
cgctcggatgaccaccaccgacgccgccgccatgacagcgacggccatcagcaccaccac
aagcgcgacgccgaagacgaccaccgccgtcgtcgccacgacgacggtggtgtcgaggaa
gaccgccgccgtgcccgccgacaccgttcgcattccccctccgagtccccaccggccgcg
aagcgggatcggtcgtcgagccgcgcgccccgggattccgtcgagcgccgcgattcggcc
gaccgcgagccgccgccgccgccgtcacggaaacggaaggaccacgacagcggcggcggc
cgccgcgacggcgacgagcccgaccgtgaaggcgggaagcggccgagggcctcagtggag
cctcctccgcggaaggaggaaaggccaaggcgagagcgcaggaggtttgaggatgttgat
gcgtatggtgatgagaggggtaagggggacaagggcagttcgtctcgtgagcacaagaag
gtagagtcaggtgctaatggagattcacagagcgccgcagccactaatggtggtgctcag
cagccgctcaattctgcacctgctgttgcagtgccatctgctaatcctgtttcttcaaag
gtatcttcaatcactaccaccaatgaaaatgggggagttagtattagatctgatgaagtt
actggaaaatctagtacagatggaactgcaaattcatccgctggcagaagtagtaactta
agtcttgatgctttagcgaaagctaaaaaagctttgcaactgaagaaggaattatcagaa
aaactcaagagattacctgcgcttaataaactcggcactactattcctgatacacaaact
cctaagaaagaaacacagtctgtttctggctcgattgcttctgcagtccatgcgggtgca
tcttctgaactgcctgctagtagtgtctctgctggcatttcagggcttaccaacattccc
aatttggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggat
ccacagtttgcacctcttatcaacatgttccctggtacatccagtgaactgactgttcct
caaagacctgccaaggctcctgttctccgtcttgatgctcaaggtagggaaattgatgag
aatggaaatgttattagcatgaccaagccaagcaacctgagtactctaaaggtcaacatt
aacaagcagaagaaggatgctttccagattatcaaaccagacttggagtcgcttgcaaaa
gctactgttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaa
aggccaggattccagtttattgaggaaggcaaactttcgaggcaggctgaactgcagagg
attaagaatcaatttggtgaagcacaagccaaagagcttaaagtaaagcaagctcaactt
gctaaggcaaaggtcgaggtagacatgaacccaaatctaattgaaattgctcctggtgga
aggcctccaaagcaaaagcagaaggaagagattcctgacattgagccatgggactcgaaa
attctgctatctcctacttacgaggacatctccttggaaaagcttaatatggataagatc
accatctatgtggaacatccagaaccattggaaccaccggctgagcctgcgccaccaccg
cctcagccacttaagctgactaagaaggagcagaagaagctcagaacacagaggcgcctc
gctaaggaaaaagacaggcaagaaatgattaggcaaggcctcttggagccaccaaagccc
aaggtcaagatgagcaaccttatgaaagtacttggtgcagaagctacacaggatccgaca
cgtatggagatggaaatccgaactgctgctgcagagcgtgagcaggctcacgtggaccgc
aacattgcccgcaaactcacaccatcagaacgccgtgagaagaaggagaggaagctgttt
gatgatcccaacacactaggttgtattgtttgtgtgtacagaatcagagacctgtcgcac
ccccagacccgcttcaaagtggacgtgaatgcccaagagaaccggctgactggtgcggcg
gttatcacagatggtataagtgttgtggttgtggaaggagggaagaagtcgatcaagagg
tacaataagctgatgctgaaccggattgactgggctgctgcagttggtggtgaggatgat
gccgacgaggaaccagacaagccggtgaatagctgcgtgttagtctggcagggtagcgtg
gtgaagcccacctttccgaggttcagtgtgcatcagtgtcggagcgaggctgctgccaag
aaggtgtttgcagatgctaaagttccacactactgggacctggctgtcaacttttcggaa
gattcgtcttga
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