KEGG   Triticum dicoccoides (wild emmer wheat): 119301944
Entry
119301944         CDS       T07278                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdc04121]
    119301944
Enzymes [BR:tdc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119301944
Ubiquitin system [BR:tdc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119301944
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-RING_16 zf-C3HC4_3 Prok-RING_4 zf-ANAPC11 zf-C3HC4_4 RINGv Prok-RING_1 zf_RING_Vps8 FANCL_C DUF7520 zf-RING_4 zf-Nse zf_RING_Vps8_fungal zf-RING_Vps41 PHD_NSD
Other DBs
NCBI-GeneID: 119301944
NCBI-ProteinID: XP_037434849
LinkDB
Position
5A:complement(417178741..417179713)
AA seq 164 aa
MGISSMPAPKESLLIYLLYHAVVSIAALAGLLRAALVFLGLPAPPSLLAGEDADGADQLT
AATPAGPSLAERFRSRFRPARFGRRRGAAASATPDCRVCLVRFEADAVVNRLPCGHLFHR
ACLETWLDYDHATCPLCRSRLLPAATTAADESWSPPAPTLTAWI
NT seq 495 nt   +upstreamnt  +downstreamnt
atgggcatctccagcatgccggcgcccaaggagagcctcctgatctacctgctctaccac
gccgtcgtctcgatcgccgccctggcgggcctcctccgcgccgcgctcgtcttcctcggc
ctgcccgcgccgccctcgctgctggccggggaggacgccgacggcgccgaccagctcacg
gccgccaccccggcgggccccagcctggccgagaggttcaggagcaggttccgccccgcg
cggttcggccggaggcggggcgcggcggcctcggcgacgcccgactgccgcgtctgcctt
gttcgcttcgaggcggacgccgtggtgaaccgcctgccctgtggccacctcttccaccgc
gcctgcctcgagacctggctggactacgaccacgccacctgcccgctctgccgctcccgg
ctcctcccggccgccaccaccgccgccgacgagtcgtggtcgccgccggcccccaccctg
acggcctggatttag

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