KEGG   Triticum dicoccoides (wild emmer wheat): 119302347
Entry
119302347         CDS       T07278                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    119302347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119302347
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     119302347
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz DUF3337 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 RAWUL Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_Nup120_160 Beta-prop_Vps41 WD40_like
Other DBs
NCBI-GeneID: 119302347
NCBI-ProteinID: XP_037435287
LinkDB
Position
5A:483415229..483423645
AA seq 751 aa
MHRVGSAGNTAGSSRPRKEKRFTYVLNDADNKKHCAGINCLSYLNASASGTSDYLFTGSR
DGTLKRWEYQNGDANFSATFESHVDWVNDAIIVGQNLVSCSSDTTLKVWNCLADGACTKT
LRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAAIAPIAKSVDAKEDEVPNGNSGP
ALSTLCNVNSSGNIVSTNGKSHGYCPIAAKGHKDSVYALDMNDTGTLLVSGGTEKVVRVW
DPRTGSKNMKLRGHTDNIRALLIDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSV
WALASTPSFGHVYSGGRDQSVYLTDLSTRESVLLCTNEHPILQLSLQDDTIWVATTDSSV
YGWPAEGQTPQKVFQKGGSFLAGNLSFSRARASLEGSAPVPVYKEPSFTIPGVPAIVQHE
IMNNRRHVLTKDTVGSVKLWEITRGAVIEDFGKVSFDDKKKELFEMVSIPAWFTMDARLG
CLSVHLDTPQCFSAEIYAVDLNVTGAQEDLKINLAHETLRGLLVHWSKRRPKPGPHSLSN
ADSSIGKDVSLKNLPHPRSDVDDGSENHANNVLPSFEFSTVSPPSIITESSSGGPWRKRI
TDLDGTEDDLPWWCVDCAENGRFPKENTKCGFYLHPAEGSPAPNITQGKLSAPRILRVLK
VANYVVEKLVLEKPLDGSPDSTFAMGLTSGTSALDSSSRLGLKPWQKLKPSVEILCNNQV
LSPEMSLATVRTYIWKKPEDLILNYRVVQSR
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgcatcgtgtcgggagtgctggaaacacagctggttcaagtcgaccgagaaaggagaag
cgcttcacatatgtgctcaatgatgctgataataaaaagcattgtgctggaatcaactgc
ttgtcgtacctgaatgcttctgcttctggtacaagtgattatctttttactgggagtcgc
gatggtaccttgaagagatgggaataccaaaatggggacgcaaacttttcagcaaccttt
gagtcacatgttgattgggttaacgatgccattattgttggccaaaatcttgtttcctgt
tcctcagacaccacattaaaggtgtggaattgcttagcagatggtgcttgtaccaagact
ctccgccagcattctgattatgtgatatgtcttgctgcggctgaaaagaatagcaatatt
gtagcctctggtggccttggtggtgaggtcttcatatgggatcttgatgctgctattgca
cctatagccaaatctgtagatgcaaaagaggatgaggttcctaacggaaactctggacct
gctttgtcaaccttgtgcaatgtaaattctagtggcaacattgtttctaccaacggaaaa
tcacatgggtactgtccaattgctgccaaaggtcataaggattcagtttatgcattggat
atgaatgatacagggacattgcttgtctctggtggtactgaaaaggttgttcgtgtttgg
gatcccaggacaggttctaagaacatgaaattgagagggcacactgacaatatcagggct
ttgcttattgattccactgggaggtattgtctatcaggctcgtctgactcaatgataaga
ctatgggatctaggacagcaacgctgtgtgcattcttatgccgttcacactgattcggtt
tgggcgctcgcaagcaccccttcatttggtcatgtttatagtggtggaagagatcagtcc
gtgtacctgacagacctctccacacgagagagtgtcttactatgcacaaatgaacaccca
atcctacagttgtccttgcaagatgatacaatatgggttgcaacaactgattcttctgtt
tatggatggccagctgaagggcaaaccccacaaaaggtttttcaaaagggaggctcattc
ttagctgggaatttgtcattctcaagagcaagagcttctttagaaggatcagcacctgtg
cctgtatacaaagagccatctttcactattcctggagttccagctatagttcaacatgag
atcatgaataatagaaggcatgtcctgacaaaggatactgttggttctgttaaattatgg
gagattactcgaggagctgttatcgaagattttggcaaggtttcgtttgatgataagaaa
aaggagttatttgagatggttagcatacctgcatggttcaccatggacgctcgattgggg
tgcctgtctgttcacctggatactccacaatgcttttctgcagaaatatatgcggttgat
ttgaatgttactggagcacaggaagatcttaagattaatttggctcatgaaactcttcgt
ggtttgttagttcattggagtaaacgaaggccgaaaccaggcccacacagcttgtccaat
gctgattcttcaatagggaaagatgtatcattgaaaaacttaccacatccaagatccgac
gtcgacgatggaagcgaaaaccatgcaaataatgtgcttccctcgtttgagttctccacg
gtttcgcctccatcaattatcacggaaagttctagtggagggccttggagaaaaagaatt
accgatttggatggaaccgaggatgatttgccatggtggtgtgtggactgtgctgagaac
ggccgatttccaaaagagaacacaaagtgtggcttttatttgcatccagccgaaggctca
cctgcaccaaacataacgcaagggaaactcagcgctccacggatactgcgagttctcaaa
gttgctaactatgttgttgagaagcttgttcttgagaaaccattggatggaagtccggac
agcacatttgccatgggtttgacctctggcacatcagccctagatagttcttcacggctt
ggactaaagccatggcaaaaactgaaaccttctgtcgagatattgtgcaacaaccaggtt
ctgtcacctgagatgagtttggcgacggtgaggacatatatttggaagaagccggaggat
ttgattcttaattacagagtggtccaatcaagatga

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