Triticum dicoccoides (wild emmer wheat): 119302578
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Entry
119302578 CDS
T07278
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119302578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119302578
03036 Chromosome and associated proteins [BR:
tdc03036
]
119302578
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119302578
Coactivators
SAGA/TFTC/STAGA complex
119302578
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119302578
STAGA complex
119302578
TFTC complex
119302578
SAGA complex
119302578
SLIK complex
119302578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Cytochrom_D1
RecX_HTH3
Beta-prop_ACSF4
PALB2_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
119302578
NCBI-ProteinID:
XP_037435512
LinkDB
All DBs
Position
5A:complement(533254454..533262258)
Genome browser
AA seq
656 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLTELALQEERNRLSTTSLSDVSLSRPDNDPARYYDGYNKL
RSWAYNSLDQYKHELLRVLYPAFIHCFMDLVSEGHTLEARAFFLKFREDHELMHSRDLQK
LEGTLSPLHLEEMDLARSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEV
SAGQPSLISDDADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALSDSDRAEAES
KDADAEDNNKKKSSEGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLP
ATPVEVEQSILEDLRNRAQLNNLALPSVSFYTFLNTHNGLNCSSISNDGSLVVGGFSDSS
VKVWDMAKIGQPAKTSSSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGD
FLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDK
IQPLRIMAGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLA
MSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVK
LWDVASSTKALKMDDTKAGSTNRLRLLKALPTKSTPVYNLRFSGRNLLFASGALSL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggcttccgc
ctcaccgagctcgcgctgcaggaggagcgcaaccgcctctccaccacctccctctccgac
gtctcgctctccaggccggataacgacccagcaagatactatgatggctacaacaagcta
agatcatgggcatacaattctctggaccaatacaagcatgaattactccgtgtcctttat
ccagcgtttatccattgcttcatggatctagtgtcagaggggcatacactagaagctcgg
gcatttttccttaaatttcgggaagatcatgaactgatgcattcaagggatctccaaaag
ctggaaggcactctttctcctttgcatttggaggaaatggatctggcccgatctttaagg
gaaaataaattcagaattaaattatgtgagtattcatatgaattacttctccagtatctc
cagaaaacacaagctcttgtgatgcttggaataatcaatgaaaggataatttttgaagtg
tccgctgggcaaccttcattgatctctgatgatgcggatgttgttgctctggttggaacc
agcaaggacttggcaaaacagataaatcagaaggaagtgcattgggggttgcttgaagat
tcagttgaggagcgtatggagaaagcactctcagattctgatagagctgaagcagaaagc
aaggatgcagatgcagaagataataacaagaaaaaatcctcagaaggtggaaagcagggt
ggtcctctgaacaaaaagctcaaaaaggataagcttgtaggtgcaacagggaaaaatacc
aaatccgaaacaagcatgatttctgcggcacctcgtgtgaaaccggagctaacccttcca
gcgacgcctgttgaagttgaacaatcaattcttgaggacctgcgaaaccgtgcacaattg
aataacttggcattgccatctgttagcttctacacattccttaatacacataacggatta
aactgctcatcgatctcaaacgatggatctttggtcgttggtgggttctcagactcgtca
gtaaaggtttgggatatggcaaagattggtcaaccagcaaaaacatctagttcacaagga
gagaatggatcttcacaggacgagcgcttgtcatcaacatctgaggggaaaagaccgtat
acattattccaaggtcattctggaccagtttattccgctgcctttagtccatttggagat
tttctcctgtcatcatcttcagattcaacaattaggctgtggagtaccaagctgaatgcc
aatcttgtttgttacaaaggacacaattacccagtttgggatgtccaatttagtccagtc
ggccattattttgccagtgcctcgcatgacaggactgctcgaatctggtcaatggataaa
atccaacctttgcggataatggccgggcatcttgctgatgttgattgtgtgcagtggcat
gtaaactgtaactacattgccaccggctctagtgacaaaactgtacggctatgggatgtt
caaactggtgaatgtatacgaatgtttattggtcataggagtatggtcttatcactggca
atgtctcctgatgggcgatacatggcctccggagacgaagatgggaccatcatgatgtgg
gatctctctactggtcgctgcgtttcaccactagcgggacacaactcttgtgtgtggtca
cttgctttcagctgcgagggagcattgcttgcatctggatcggctgattgcactgttaaa
ctctgggatgttgcgtccagcacaaaggccctgaagatggatgacaccaaggctggttct
acgaaccgactgaggctgctgaaagctctccctacaaaatcgactcctgtttataacttg
cggttttctgggaggaatcttttgtttgcatctggcgctctctcgctatag
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