Triticum dicoccoides (wild emmer wheat): 119302658
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Entry
119302658 CDS
T07278
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119302658
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119302658
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119302658
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
119302658
NCBI-ProteinID:
XP_037435601
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Position
5A:complement(541890069..541895139)
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AA seq
627 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDSLDADIICFQETKLSRQDLSGDFIMAEGYEAFI
SCNRSSRGRGPYSGVATFCRVTSAFASQEVALPVAAEEGFAGLQGSAKDNEVIGDFVLDM
PMDEEDLGEITREELLRVDNEGRCIITDHGHFVLFNIYGPSIGEDDEERVRFKLLFYKIL
QKRWEFLLALGKRVFVVGDLNIAPSSIDRCDASPGFEKQMFREWLRSMLREHGGPFFNAF
RSKHPERTGAYTCFNQKVGAEEYNYGSRIDHILISGACFHDCNSVEDHSIFHCHVEDCEI
MNHFRRGDSGNISKWKGGRSSKLEGSDHIPVYMILNGIPELPAHNTPPSAARYLPEIRGR
QQSIVSFLSKGKLCEAEDGPGLNISRDRENQSCCSDDLERRSISKEELATGITEFSKGVN
QPSPTSKRRNLDHWINEGSSGSSVTLLAAQGMKTSFSGVKSVSNKKNKHNLSSQPTIKSF
FRRPETKPGDANINSLASSVDTVPSSVDTLPKMDELCSPQDDSLQENIQCTAAADGDPDN
SNISSSLSTYKCNIATLEWQRIQQRMKMTLPLCKGHREPCIPRSVKKGSNIGRLFYVCAR
AQGPSSNPEANCNHFQWASVKSKGKRQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacatacaacgtgaacgggctgcggccgcgggtggcgcagcacggc
tcgctccgccgcctcctcgactcgctcgacgccgacatcatctgcttccaggagaccaaa
ttgtcgaggcaggacttgtctggggatttcataatggccgagggatacgaggctttcatt
tcgtgcaatcgttcttcgagagggcgtggaccatactctggtgttgcaacgttttgccgg
gtgacatcagcatttgccagtcaggaggttgctttgccggtagcagctgaagaaggcttt
gctggattacagggctctgcaaaggacaatgaagttattggggattttgttcttgatatg
cctatggatgaggaagatcttggcgaaataacaagagaggagctgctcagggtggacaat
gaggggcgatgtatcatcactgaccatggacattttgttcttttcaatatatatggccca
tctattggagaagatgatgaagaacgggttcgttttaagctactgttttacaagatattg
cagaaacgatgggaatttctactggctctcggaaagagagtcttcgttgttggagatttg
aatattgctcctagttcgatagataggtgtgacgcatctcctggatttgagaagcaaatg
tttcgggagtggctgagatccatgttaagagaacatggaggtcccttttttaacgctttc
agatcaaagcaccctgaaaggacgggagcttatacttgttttaatcaaaaagttggagct
gaagaatacaattatggttctagaatagaccacattctcatttctggtgcctgttttcat
gactgcaattcggtggaagatcatagcattttccattgccatgttgaggattgtgagata
atgaatcatttcagaagaggggattcaggaaatatctcaaagtggaaaggagggagaagt
agtaagctagaagggtctgatcatattccagtttatatgatactgaacggaatacctgaa
cttcctgcccataataccccaccatcagctgcaagatatctcccagaaatccgtgggcgg
caacaaagtatagtatcattcctcagtaaaggaaaattgtgtgaagctgaagatggccca
ggtttaaacatatccagggatagagaaaaccaaagctgctgtagtgatgacctggaaagg
agaagcatatccaaggaagaattagcaactggtataaccgagttttctaaaggtgttaac
caacctagtccgacgtctaagcggaggaatcttgatcattggataaatgaaggttcaagt
ggcagctctgtaacattactagcagcacaaggtatgaaaacttccttttctggtgtcaag
tctgtgtcaaacaagaaaaacaagcataacttatcctcacagccaacaatcaagtcattt
tttcgaagaccagaaacaaagccaggggatgccaatatcaatagcttagctagttcagta
gatacagtacctagttcagtagatacactacctaagatggatgaattatgttctccacaa
gatgatagtctgcaagaaaacatccagtgtacagctgcagctgatggagatccggataac
tcaaacatatcatcttcactttcaacttataaatgcaatattgcaacattggagtggcaa
agaatacaacagagaatgaaaatgaccctaccactttgcaaaggacaccgtgaaccttgc
attccaaggtctgtgaagaagggctccaatatcggtcgcttattctatgtctgtgcccgt
gctcagggaccttcatcaaatccagaagcgaactgcaatcactttcaatgggcctctgta
aaatctaaagggaagcggcaatga
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