Triticum dicoccoides (wild emmer wheat): 119302829
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Entry
119302829 CDS
T07278
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119302829
03460 Fanconi anemia pathway
119302829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119302829
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119302829
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119302829
FA (Fanconi anemia) pathway
Downstream FA components
119302829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
119302829
NCBI-ProteinID:
XP_037435763
LinkDB
All DBs
Position
5A:complement(562024523..562034154)
Genome browser
AA seq
1358 aa
AA seq
DB search
MGAAHDDDDGDFAATPAPAPAPAPARGVYQVSGVPVEFPYKPYGTQLAFMGRVIATLDRG
RRQGRSHALLESPTGTGKSLSLLCAALAWQRHYPFRAPPAPAAPDPLLHGGGFVPDDTQQ
QPTPGIPEKAAAAAKKKNAPTIYYATRTHSQITQVVRELRKTSYRVRMAILASRKHYCVN
KTACMADSIDEGCKRLLDDKVQGCPEFKNAQKLSRHPSLQTGGSYEVHDIEDLLKVGRQV
KGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDINIAGSIVILDEAHNIEDIARDSGS
VDVDEESLNSLKEELAKLATDQAVGKIYQPLHDIIEGLSTWISAQEGDPRDNEFDHPPSF
WTGENAVKELQKAGITPAYFPILQECATKAVKAASDTESEGDHLTGHGAMTLESLFSSLS
HFFGRNGRHLYDYQLAIQRFAHREGTSAFGVRNVMSLWCLNPAVVFQDIADLTHSVILTS
GTLSPMGSFASELGVQFDACMEAPHVIDADSQVFASVLSSGPTTHRLNASYKTADAYSFQ
DELGASIEEICRIVPGGALVFFPSYKLLDKLKVRWSQTGQWARLNARKPVFVEPRGSTEE
LEPVLNGYYNAILGKVPLKKGRGGAKQIVKNRVRKNSSQESAKGGAAFLAVCRGKVSEGI
DFSDDNARVVVIVGIPFPNINDVQVKLKKKYNDSYKSSKNLLSGSEWYCHQAFRALNQAA
GRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYDSFQETMDKMEKFFQKAEEH
IKIKRQEMSTKDKLDDDLLTSHGDKRKLHWPEPNFSKHSVLQSNQKGKLDDNLLTSYGDK
RILPWPKPDFSKHSVQQSNQKVKNKHGSLKVSNIDVVGVDHENYGRPCTSSEACQVSSKS
SDFTKKKSSPVPGSLSTACQLPPSHKIQNNLEDESDIGGNHAVDINVIDLEICDSMSGHA
KLTIFTPPEDRSQEPTLVERTSAKDPVASPSIHSEVNTSAAMDNGEDQVVGVSASLSTAN
RNQSCVSTSAGTPERTANRGYHLDHESSIDRSVNSQYQKRRRFNIPVSCCTGTEHSNPSN
PSSTSFCNTDCAVSMAPRDLKRTDGLCCESQKMSRCENFKLERSHKAAEFASNKSAGTKL
DIRCTTCKTPLGLQKDGFLVSCSLASPSKLYLTCLLRHGLSTVGFAEDLMSSPPAVVNVL
VCEASSLNQGILSKFCSEGSAHQSGVWSEKDGCVYKPVTCPFCPRENSFATVLGAQVLAA
DASNLESLNKVLLFADCLDLKHEPSNEQVARDHTVASNPMGTDASKPMSPPPVIDLESFA
YKPVKKEPVSLSTRRSKLRLPSTNRSTKPQLVHNVEDS
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgcccacgacgacgacgacggcgacttcgccgccaccccggcgcccgcgccc
gcgcccgcgcccgcgcgcggggtgtaccaggtgagcggcgtgccggtggagttcccctac
aagccgtacggcacgcagctggccttcatgggccgcgtcatcgccacgctcgaccgcggc
cgccgccagggccgctcccacgcgctcctcgagtcgcccaccggcaccggcaagtcgctc
tccctcctctgcgccgcgctcgcctggcagcgccactacccgttccgcgcgccccccgcc
cccgccgcccccgaccccctcctccacggcggcggcttcgtccccgacgacacccagcag
cagcccactcccggcatcccggagaaggcggcggcggcggccaagaagaagaacgcgccg
accatctactacgccacgaggacgcactctcagatcactcaggtggtccgggagctgcgc
aagacctcgtaccgagtgcgcatggccatcttggcctcaaggaagcactattgcgtcaac
aagaccgcatgcatggctgactcaattgacgagggatgcaagaggctcctagacgacaaa
gttcaaggatgcccagaattcaagaatgcacagaaactgagtcgtcatccatcccttcag
accggtggctcctatgaagttcacgatattgaggatcttcttaaggttggaagacaagtc
aaaggatgtccatattttgctgcgcaaaccatggcagaagcagctcaactggttttctgc
ccatataactacctaattagtccaattgtcaggagagcaatggacattaatatcgctggc
tcaatcgttattctcgatgaagcgcacaacatagaagacatagcacgtgattctggaagt
gttgatgttgatgaagaatcacttaacagtctcaaggaagaactagcaaagttagccact
gatcaggctgttggaaagatataccaacccttgcatgacatcattgaggggcttagcact
tggatttctgctcaggagggtgatccacgagataacgaatttgaccatcctccttcattt
tggactggtgaaaatgctgtgaaggaactccagaaggctggtattactcctgcatacttc
ccgatattgcaggaatgtgcgacgaaggcagttaaggctgcttcggatactgagtcagag
ggagaccacttaactggtcatggtgctatgacactggagagtctattctcctcactgagt
cacttttttggtaggaatgggcgccatttgtatgattaccaacttgctatccaacggttt
gctcacagagaaggcacttctgcctttggagtgagaaatgtgatgagtttgtggtgcctc
aatcctgctgttgtttttcaagacattgcagatctaacccattcagtaatattgacatct
ggcacactctctccaatgggctcctttgcatctgaactcggtgtacagtttgatgcttgc
atggaagctcctcacgtaatcgatgctgattctcaggtttttgctagtgtactgtcatct
ggcccaacaacacatcgattgaatgccagctataaaactgcagatgcatattctttccag
gatgaacttggagcttcaatagaagaaatatgcagaatagtgcctggtggtgctctagtg
ttttttcctagctataagctgttggacaaattgaaagtgcgctggtctcagactggtcag
tgggcacgattgaatgctcgaaaaccggtgtttgttgagcctagaggtagtactgaggaa
ctcgagcctgtcctaaatggatactataatgcaatccttggtaaggttcctcttaagaaa
ggcagaggtggtgcaaaacaaattgtgaagaatcgagtgagaaagaattcatcacaggaa
tctgctaaaggaggagctgcttttcttgcagtttgccgtggcaaggtatctgaaggaatt
gacttctctgatgacaatgctagggttgttgtcattgttggcattccgttcccaaatata
aatgatgtccaagtaaagctgaaaaagaaatataatgattcctacaaatcatcaaagaat
cttttgagtgggagtgaatggtactgtcaccaagcatttcgtgctctgaatcaagctgct
ggtcgatgtattcggcataaatttgactacggaggcataattttgattgatgagcgatat
caggaagagagaaaccttctacacatttcaaaatggcttaaaaactcaattaagcattat
gatagcttccaggagacaatggataagatggagaagttttttcagaaggctgaggaacat
attaagatcaaacgtcaagaaatgtccactaaggataagttggatgacgatctacttaca
tcacacggtgataaaagaaagttgcattggccagaaccaaatttctcaaaacactcagta
ctgcaaagtaatcagaagggtaagttggatgacaatctacttacatcatacggtgataaa
agaattctgccttggccaaaaccagatttctcaaagcactcagtacagcaaagtaatcag
aaggtaaagaacaaacatggcagtctgaaggtttcaaacattgatgttgtgggagtagac
catgaaaattatggcaggccttgtacatcatccgaagcatgccaggtctcttcaaaatct
tctgacttcacaaagaaaaaaagctcccctgtaccaggaagtctttcaacagcatgccaa
cttcctccatcgcataaaattcagaataatttggaagacgaatcagacattgggggaaat
catgcagttgatataaatgttatcgacttggaaatttgcgattctatgtctgggcatgca
aagttaacaatcttcactccaccagaagacaggtcgcaagagcctactcttgtggaaaga
acttctgctaaggatccagttgctagccccagcattcattctgaggtaaatacatccgca
gcgatggacaatggtgaagatcaggtcgtaggcgtgtctgcttcgctctcaacagctaac
agaaaccaatcttgcgtgtcaacatcagcgggtactcctgaaagaacagccaatagaggt
tatcatttggatcatgaatcttcaatagacagaagcgtaaattctcagtaccagaaaagg
agaaggtttaatataccagtgagctgttgtactggcacagagcattctaatccttctaat
ccttcaagcacatctttctgcaatactgattgtgctgttagcatggcgccccgagatctg
aagagaactgatggtctgtgttgtgaaagtcagaaaatgtccaggtgtgaaaatttcaag
cttgaaagaagtcacaaggcggcagagtttgcatcaaataaatctgcaggaacaaagctt
gatattcgttgtaccacatgcaaaacgccacttggattacagaaggatggctttcttgtt
tcatgttcattggcatcgccctcaaaattgtacttgacatgtcttttgagacatgggcta
tcaactgttggcttcgcagaagatcttatgtcatcgccaccagctgtggtaaatgttctt
gtatgtgaagcttcttcactcaatcaagggatccttagcaaattctgcagtgaaggttct
gctcatcagtccggtgtttggtctgagaaggatggatgtgtatacaagccagtaacatgt
cctttctgtcctcgtgaaaattcttttgccacggtgctcggagcgcaagttcttgcagct
gatgcttcaaatctggaatcattaaacaaggtgctcctgtttgctgattgtttggatctc
aagcatgaaccatcaaatgaacaggttgcaagagatcatacagttgctagtaaccccatg
gggacagatgctagtaaacccatgtcacccccaccggtgatcgatcttgagagttttgct
tataaaccagtgaagaaggaacctgtgtcactaagcacacggaggtccaagcttaggtta
cctagcacgaacagatccacaaaaccacaactggtgcataacgtggaggactcatag
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