Triticum dicoccoides (wild emmer wheat): 119302830
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Entry
119302830 CDS
T07278
Name
(RefSeq) DNA mismatch repair protein MLH3-like isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119302830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119302830
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119302830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119302830
NCBI-ProteinID:
XP_037435764
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All DBs
Position
5A:complement(562035695..562045337)
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AA seq
1212 aa
AA seq
DB search
MQSIKRLPKSVHSSLRSSIILSDLPRVVEELVYNSIDANARKIDVSVNVRACYVKVEDDG
CGIARDELVLLGEKYATSKFPDVMGDAESSSRSFGLNGEALASLSDISVVEVRTKARGRP
NSYCKIIKGSKCSHLGIDDQREAVGTTVVARELFYNQPVRRKQMQSGHKRELHNVKKCVL
RIALIHPQLSVRLLDTDSEDQLLYTVPSSSPLPLISDSFGNDVSSCLHEISTSHQSWALS
GHISGPTNVFCNKDFQYLYINSRFVSRSPIHNILNSLAASFQSSITRTIEETDIQSRKRQ
KTNVYPAFLLNFFCPRSSYDLHFEPSKTIVEFKDWQSILFFFEQTITNYWKKHVPQSSKG
KAIDDTCVPLKSDVKLNRAFLKHQNVQNKEDDADLQDHTPRKSSVRESNFGTGAATAPKD
LDYFSFDMKPPPWHVCYPDRISDASEHSDNVARNDLTHFPKRVSYQWLEDGSSELEDCSL
SGANPTVWKKRWMEGIFHGHAYSCEVGNFEDVQTEGLSADNQESEIMGPEIDLQEPCFGV
VNRPNRITCDFMHNETNINGNMSGCDGLYTEFDRFDDDCLLNEVTETMGDISCPEMPHFS
DEFYHEGCSTPIILKRCSTRKQLGTAAGYVDGLETNAIAQMNFPDIRAAWESDVMDMSSI
KDNHLHLSHSFLLPDTPSSQSHARTGLELQGRSSKRFASWNCENMDSDFRSTWDRFTSNS
SRICEGSKHFNNLDDEPQSLNYLNHVDQFVSEDDEIPWKSKISAPLSHIISPEKSTNGYQ
LNGSSSHLANNSVLIKDLPNQDNFGCDRRSRFSKGRSRSCSAPPFYKGKRKFPGLNHPQT
KLTADGDKDIPIKDSEETAPAPENISNMSATQPIPETCSSEFSGLNFSLKGNMKMHEETC
SDGLENFTAQITKWRDDSDQHTALESPHIPSACYDDILNISSGPLHLSSSSLVPECIDKN
CFEEARVLLQLDKKFIPVISGEMLLLVDQHAADERIRLEELRSKVLSDEDRGITYLDSEK
EMALPEAGFQLFQKYAEQIQKWGWIINNSSTSSHSFKKNMNILRKQGRVVTLAAVPCILG
VDLTGKDLTDFIQQLDESDGSSSIPAAVLRILNYKACRGAIMFGDPLLPSECSLIIEELK
ATSLCFQCAHGRPTTVPIVNVASLRRHLARLGAPSGWSEAEEPWHGLSQHEASLERARTR
LRQLRRLRRGTL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcataaaacgcttgcccaaaagcgtccacagctccttgcgctcaagcattatc
ttgtctgacctcccaagggttgtcgaggagttggtatataatagcatcgatgcaaatgcc
agaaagatcgacgtttcagtaaatgtcagagcatgttatgttaaagtggaagatgatggt
tgtggtattgctcgagatgaattggttctattaggagaaaaatatgcaacatccaagttt
cctgatgtcatgggtgatgcggaatctagttctagaagttttggattaaatggtgaagcg
ctcgcatcactttctgatatctctgtggttgaagtcaggacgaaggctcgtgggaggcca
aattcgtactgcaagataataaagggatccaaatgctcacatttaggaatagatgaccag
agggaagctgttggtacaacagttgttgctcgggagcttttttataaccagcctgtgcgg
agaaaacaaatgcaatctggtcataaaagagaactgcacaatgtgaagaagtgtgtcctg
cgaattgcacttattcatccacagctttcagtcagacttcttgacactgacagcgaagat
cagttgctatacacagttccttcatcatcccctttgcctcttatatcagacagttttgga
aatgatgtctccagttgccttcatgaaatatctacctcacatcaaagctgggctctttca
gggcacatctctggaccaacaaatgtgttctgtaataaggatttccagtacttgtatatc
aactcaagattcgtcagtagaagcccaatccataatattctgaatagtctggcagctagt
ttccagtcttctattacaaggacgattgaagaaaccgatattcagagccgaaagaggcag
aagactaatgtctaccctgcatttttgctgaacttcttctgccctagatctagctatgat
ctacattttgagccttcaaagactattgtggaattcaaggattggcaaagtatcttgttt
ttctttgaacaaactatcacaaactactggaagaagcatgtaccacaatcatcaaaaggc
aaagctattgatgatacctgtgttcctctgaaaagtgatgtgaagttgaatagggctttc
ctaaagcatcaaaatgtacagaacaaggaagatgatgctgatttacaggatcacactcca
cgtaagagttcagtcagagaaagcaattttggtacaggtgcagcaacagctcctaaagac
ctggactacttttcttttgatatgaaaccacccccatggcatgtctgttatccagatcga
atcagcgatgcatctgaacactctgataatgttgctaggaacgatcttacacattttcct
aaaagggtcagttatcagtggttggaggatggttcctccgagctagaagactgtagtctt
tcaggtgctaacccaactgtttggaaaaagcgatggatggaaggtatattccatgggcat
gcatattcctgtgaagttggaaattttgaagacgtgcaaactgaaggcctttcagctgat
aaccaagagtctgagataatgggtccagaaattgatctccaagaaccttgctttggggtt
gtcaatagacccaacagaattacctgtgattttatgcataatgaaactaatataaatgga
aacatgtctggctgtgatggattatatactgaatttgatagattcgatgatgattgccta
ctcaatgaagtcacagagacaatgggtgatatttcttgccctgagatgccccacttcagt
gatgaattctaccatgaaggttgtagtacccccattatcttgaaaaggtgcagtacaaga
aagcagttggggactgcagcaggatatgttgacggccttgaaactaatgcaattgctcag
atgaacttccctgatatccgtgcagcgtgggaaagtgacgtcatggatatgtcctccatc
aaagataaccatcttcatttatctcattcattcttgttacctgatacacctagcagtcaa
agtcatgcaaggactggcttggaattgcaggggagatcaagtaaaaggtttgcttcttgg
aactgtgaaaatatggatagtgattttagatctacttgggacagattcaccagtaattcg
tcaagaatatgtgaaggatctaaacatttcaataacttagatgatgaacctcagtcactg
aattacctcaatcatgtcgatcagtttgtttctgaagatgatgagataccgtggaaatca
aaaatcagtgcaccattgtcacacattatttctcccgagaaaagtaccaacggttaccag
ttgaatggctcttcttcccacctggcaaacaacagtgtgcttattaaagatctacctaat
caagacaattttggatgcgacaggagatccaggttttccaagggtagatctaggagctgt
tctgccccaccattttacaaaggcaaacgaaaattccctggattaaatcatcctcagact
aaattgacagcagacggtgataaagatatccccattaaggactcagaagaaactgcacct
gcaccagagaatatctcaaatatgagtgcaacccagcctattcctgagacttgcagcagt
gaattttctggcctaaatttcagcttgaagggaaacatgaaaatgcatgaagagacatgt
tctgatgggcttgaaaattttactgctcaaataactaaatggcgggatgactctgaccag
catacagctttggagtcgccacatattccttccgcatgctacgacgatatacttaacatt
tcttctgggcctttacatctctcttctagctcgctagttcctgagtgtattgataaaaat
tgctttgaggaggcaagagttttgttgcagctggataagaaatttattcccgtcatatct
ggggaaatgctactccttgttgatcagcatgcagctgatgaaaggatacgtttggaggag
ctccgtagcaaggttttatcagatgaagaccgaggtatcacttacttggactcagagaag
gaaatggctctccctgaggctggatttcaattgttccagaagtatgctgagcagattcag
aaatggggctggattatcaacaattccagcacttcctctcattcattcaaaaagaacatg
aacattctgaggaaacaaggccgtgtagttacccttgctgctgttccatgtattttgggt
gttgatttgacaggaaaagatcttacggactttattcagcagcttgatgagagcgacggg
tcatcgtctatccctgcagcagttctccgtattcttaattacaaagcttgcagaggggca
atcatgtttggcgatcccttgctaccgtcagagtgctctctgatcattgaagagctgaaa
gcgacgtccctgtgcttccagtgtgctcacgggcgtccgaccaccgtgcccatcgtgaac
gtggcgtccctccgccgccacttggcaaggctgggagcgccgagcgggtggagcgaggcg
gaggagccctggcatggcctgtcgcagcacgaagccagcctcgagcgcgcccggacccgc
ctcagacagctgaggaggctgcggcgtggcaccctgtag
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