Triticum dicoccoides (wild emmer wheat): 119302862
Help
Entry
119302862 CDS
T07278
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119302862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119302862
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119302862
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119302862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
CHASE5
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
119302862
NCBI-ProteinID:
XP_037435801
LinkDB
All DBs
Position
5A:565921897..565926968
Genome browser
AA seq
200 aa
AA seq
DB search
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcaatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaggcgcacggagccgtgccgcagccgggg
agcgtcgtcattgcccgtgtgacgaaggttatggctaggatggcttctgcagatataatg
tgtgtcgactcaaaggctgtcaaggagaagttcactggcatgataaggcaacaagatgtt
cgtgcaactgagattgacaaggtggatatgtaccagtcatatcgacctggcgacattgtt
agagctctggttctctctcttggggatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagccggtggtacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaatcgagcaaagaaaagttgcaaaggtggaa
tag
DBGET
integrated database retrieval system
