KEGG   Triticum dicoccoides (wild emmer wheat): 119302940
Entry
119302940         CDS       T07278                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119302940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119302940
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119302940
 Complex B
    119302940
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 DUF4154
Other DBs
NCBI-GeneID: 119302940
NCBI-ProteinID: XP_037435893
LinkDB
Position
5A:complement(572348316..572353172)
AA seq 620 aa
MAEHDAPPESGAARSPPAKKRGGDARSPQQDAQPLSSRDRVRERDEDKDRERHRRHGEDR
ERYRDRESVRERGEGSRDRERHHRDHREESRDRERHRREHREESRDRERHHREHREGSRD
RERHHREHREGSRDRERHHREHREGSRDRERHHRDHREGSRDRERHHRDHRERSERREHR
DRSDDRDYRRSCDRDAERRDRDRDGHRRHRSRSRSRSESQSKRMSGFDQAPSEAIPILAP
TATPVQLPELPAANPGMFPNMLPNLVNVPALGQPLAMTQQATRHARRVYVGGLPPIANEQ
TVAAFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGA
PVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAGGGLEGPDRIFVGGLPYYFTEA
QVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDVTVTDIACAALNGIQLGDRTLTVR
RANQGAEPRPEQENILLQAQQEAQMKRLVYEVGGALATKVVCLTQVVSADDLRDDEEYND
ILEDMTLEGHKYGNLVQAVIPRPHPSGDPVAGVGKVFLEYADVESSAKARIGMHGRKFDG
KETVAVFYPENKFAEGDYDY
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggccgagcacgacgcgccccccgagtccggcgccgcgaggtccccgccggccaaaaag
cgcggcggcgacgcccgctccccccagcaggatgcgcagcctttgagttccagagaccgg
gtcagggagcgcgatgaggacaaggacagggagcgccacaggcgccacggggaagaccga
gagaggtaccgggacagggagagtgtccgtgaacgcggtgaagggagcagggatcgtgag
cgccaccatcgcgaccaccgtgaagagagcagggatcgtgagcgccaccgtcgcgagcac
cgtgaagagagcagggatcgtgagcgccaccatcgcgagcaccgtgaagggagcagggat
cgcgagcgccaccatcgcgagcaccgtgaagggagcagggatcgtgaacgccaccatcgc
gagcaccgtgaagggagcagggatcgtgagcgccaccatcgcgaccaccgtgaagggagc
agggatcgtgagcgccaccatcgcgaccaccgtgaaaggagtgagagaagggagcaccgt
gaccgttccgatgaccgtgactaccgccggagctgtgatcgtgacgctgaaagaagggac
cgtgatagagatggccacagaaggcatcgctcccgctcccgctcccgttcggagagtcag
agcaaacgcatgagtggatttgaccaggcaccatcagaagccattcctatactcgctccc
actgcaaccccagttcagctacctgaacttcctgctgctaatcctgggatgtttccgaac
atgctcccaaacttggtcaatgtacctgccctaggacagccactagccatgacacaacag
gctactcggcatgctcgtcgtgtttatgtcggtggacttcctccaatcgccaatgaacag
acggttgctgcattcttcaatcaagttatggctgctatcggaggaaacacatttgctcta
ggtcatgcagttgttaatgtatacataaaccacgacaagaaatttgcttttgttgagatg
aggtctgtggaggaagcaagcaatgcaatggccttggatggtataatgtttgagggagca
ccagtgaaagttaggaggccgacagactacaatccttcccaggcagctgcattgggtccg
agccagccgaaccccaacctcaatctcgctgctgttggcttgacacctggagcaggtgga
ggtttagaaggccctgaccgcatttttgtgggtggtctaccctactacttcacagaggct
caagtgcgggagttgcttgaaacttttggacctcttcgtggatttgacattgtgaaggat
aaggaaactggcaactcgaagggatatgccttctgtttgtacaaggatgtgactgtcacc
gacattgcctgtgctgctctgaacggtatccagttgggtgacaggactctcacagtcagg
cgagcaaaccaaggagcagaacctaggccagagcaagaaaacatcctcctgcaggcacag
caagaggcgcaaatgaagagactcgtgtatgaagtcggcggagccctagcgacaaaggtg
gtatgcctgacccaggtggtttcagcagatgaccttagagatgatgaggaatacaatgac
atactggaagacatgacgctagaaggacacaaatatggtaacctggtgcaagctgtgatc
ccacgaccccatcccagcggtgatcctgtcgctggagttggcaaggtgtttttggagtat
gccgatgtggagagctcggccaaggcaaggatcgggatgcatgggaggaagttcgacggg
aaggagacggtcgccgtgttctaccccgagaacaagttcgctgaaggcgactacgactat
tag

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