KEGG   Triticum dicoccoides (wild emmer wheat): 119303436
Entry
119303436         CDS       T07278                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16-like
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119303436
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119303436
 Complex B
    119303436
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf-CCCH_4
Other DBs
NCBI-GeneID: 119303436
NCBI-ProteinID: XP_037436460
LinkDB
Position
5A:616435020..616441466
AA seq 755 aa
MSTAAGDLPAASTRSERRKERKKERRRRARREAAAAARAAAEALAADPEEGRRLRELEEA
EAAASDRARRAFEDAERRWLEKAASRAAEEAAAAAAEEEARAAEASTRDKYNDEHRDETE
DDGEWEYVEDGPAEIIWQGNEIILKKKKIKIPKRTEDKPLSQEEERPTSNPLPPQSVPVA
SQRREPSLSARELLEKVAQETPNFGTEQDKAHCPFYLKTAACRFGVRCSRVHFYPDKSCT
LLMKNMYNGPGLVLEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFH
LRGNAYVHYKALDSALLAYNSMNGRYFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSH
GVACNFIHCFRNPGGDYEWADWDNPPPKYWTRKMAALFGPSDDAVFDKASDTPDFERLHS
SDRKRQRSSDDRYISSRHGDGDTHKRHSSRVFSHSKQEQSNHIMKYGHTRDRREPSAANE
QRGQEIEDDTGRYCSPMENERVSQAHKHEEKHRDGHGDGARGYNGKIKSRKHRSERHESL
ESGCSDWPSEFADAGTSRSPSGSKSTNRHNNHKRSRRQSSDDPNLERGYTAAGKSSGKVH
IAKSSSRHYVEDDSYGEKGSRRGKSGKHSDRCDDPDDRWLATNSDVDSDAETRFPRSSSG
VGKGGRNDDAPPDEDDRYQRSSSRSGRSRAKDDKSSSRRKKHHSEIRKTSDSDDGPSDSS
DIRDLSLPAWRSRSRSSEEGLSLHKRRKGRRGHDS
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgtccacggcggccggtgatctcccggcggcgtcgacgaggagcgagaggcggaaggag
cggaagaaggagcgccgccggcgcgcgcgcagggaggcggcggcggccgcgcgggctgcg
gcagaggcgctcgccgccgacccagaggaggggcgccgcctccgggagctcgaggaggcc
gaggccgccgcgtccgaccgcgcgcgccgcgcctttgaggacgccgagcgccgctggctt
gagaaggccgcctcgcgtgccgccgaggaggcagccgcggcggctgcggaagaagaggcg
agggccgccgaggcttccacacgcgacaagtataacgatgagcacagagacgagacagaa
gatgatggggaatgggagtatgttgaagatggaccagcggagatcatatggcaaggaaat
gagatcattctgaagaagaaaaagatcaaaataccaaagaggacagaggataaaccacta
agtcaagaggaagagagacctacatcaaatccgctgccacctcagtctgtacctgttgct
tctcagaggagagaaccttccttgtctgctcgagaactacttgagaaagttgctcaagag
actccaaatttcggaactgaacaggataaggcccattgcccattttacctcaagacagca
gcttgccgctttggagtgcgctgcagcagagttcatttctaccctgacaaatcatgcaca
ttgctcatgaaaaacatgtataatggtccgggccttgttttggaacaagatgaagggctt
gagtttacagacgaagagattgaacagagctatgaagaattttatgaggacgtgcacaca
gaatttctgaaatttggtgaacttgtcaacttcaaggtatgtagaaatggatcattccat
ctccgaggaaatgcctatgtgcattataaagccttggattcagctcttcttgcctacaac
agcatgaatggtcgatattttgctgggaagcagataacatgtgagtttgttgctttgacg
aaatggaagtcagcgatctgtggtgagtacatgaggtcaagattcaagacatgttcacat
ggagttgcttgtaatttcattcattgctttcgtaaccctggtggagattatgagtgggct
gattgggacaatcctccacctaaatactggactcggaagatggctgctctgtttggtccc
tcagatgatgctgtttttgacaaggcgagtgataccccagattttgaacggttacacagt
tcagataggaagagacagagaagttctgatgacaggtatatttcaagtagacatggggat
ggagatacacataaacggcattcatcaagagttttttcacattcgaagcaagagcagagc
aaccatatcatgaaatatgggcatactcgagatagaagagaaccatctgcagcaaatgag
caacgaggccaagagattgaagatgatactggcagatactgttcgcccatggaaaatgaa
agagtgtcccaagcacataagcatgaagagaaacatagagatggccatggcgatggagca
cgtggatacaatggtaaaatcaagtccaggaagcacagatctgaacggcacgaaagtctg
gagtctggatgttctgattggccttcagaatttgctgatgctggcacgagcagaagtcct
tcaggcagcaagtccaccaacaggcacaataatcacaaaaggagccggaggcaatcctcg
gatgaccccaatcttgaaaggggctacaccgctgcgggcaaatcatcagggaaagtgcac
attgccaaaagtagctcgagacattacgttgaagatgactcttatggtgagaaaggtagt
agaagaggcaaatctggaaagcacagtgatcgttgtgatgaccctgatgatagatggcta
gcaacaaatagtgatgttgattcagatgcagaaactcgattcccgaggtcaagcagtgga
gttggtaaaggtggaaggaatgatgatgctcctccagatgaggatgatcgttatcaaagg
tccagcagtaggtctggtaggtcaagagcgaaggatgacaagagcagcagcaggaggaag
aagcatcacagtgaaatcagaaagactagcgacagcgatgatggcccctcggactctagt
gacattagggatttgagcttgcctgcgtggaggagtcggtcaagaagcagcgaggagggt
ctctcattgcacaaacggaggaagggccgccgtggtcatgattcgtga

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