Triticum dicoccoides (wild emmer wheat): 119303702
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Entry
119303702 CDS
T07278
Name
(RefSeq) RNA-binding protein Y14B-like isoform X1
KO
K12876
RNA-binding protein 8A
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119303702
09122 Translation
03013 Nucleocytoplasmic transport
119303702
03015 mRNA surveillance pathway
119303702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119303702
03041 Spliceosome [BR:
tdc03041
]
119303702
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119303702
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119303702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
119303702
NCBI-ProteinID:
XP_037436737
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All DBs
Position
5A:complement(645072244..645076351)
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AA seq
214 aa
AA seq
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MAAEDVEFVDYERDDGDEDDEGMEDGEVSARALPVPHIAAPAVPRTSRGRFVGRSRSVIA
STRDRFDSLPFAGTSAHGGPQRSIEGWIIIVSGVKEDAEESDLYDAFAEFGEVKDLHLNL
ERRTGYGKGYALVEYGCFEEAQTAIRSMNGTQLLTKTIHVDWAFNRGPIQNVTSARCEQN
VFCPAFPLVDKSLCQFDMILNLDHTLVTDSVFFV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggacgtggagttcgtggactacgagcgggacgacggcgacgaggacgac
gaggggatggaggacggggaggtctcggcccgcgcgctccccgtgccccacatcgccgcc
cccgccgtgccgcgcaccagcaggggccgcttcgtcggccgcagccgctccgtcatcgcc
tccacccgcgaccgcttcgactccctccccttcgccggcacctccgcgcacggcggcccg
cagcgctcaattgaaggatggataataattgtctcaggagtcaaagaagatgcagaagaa
agtgatctgtatgatgcttttgctgagtttggtgaggtcaaggacttgcatctcaacctg
gaacgccgcactggatatggcaagggatatgcattggttgaatatggatgttttgaggaa
gcacaaactgcaatcagaagtatgaatgggacacagctgttaacaaagaccatccatgtt
gattgggcattcaacagaggtcctatacagaacgtcacaagtgcacggtgcgaacaaaac
gtgttttgtcctgcatttcctctggttgataaatctttatgccaatttgatatgatactt
aatttggaccacacgcttgttactgacagtgtcttctttgtgtaa
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