KEGG   Triticum dicoccoides (wild emmer wheat): 119304309
Entry
119304309         CDS       T07278                                 
Name
(RefSeq) coatomer subunit alpha-3-like
  KO
K05236  coatomer subunit alpha
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tdc04131]
    119304309
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tdc04147]
    119304309
Membrane trafficking [BR:tdc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    119304309
Exosome [BR:tdc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119304309
  Exosomal proteins of bladder cancer cells
   119304309
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Fis1_TPR_C ENTH Zn_ribbon_19
Other DBs
NCBI-GeneID: 119304309
NCBI-ProteinID: XP_037437382
LinkDB
Position
5A:complement(703021631..703026790)
AA seq 1218 aa
MLTKFETKSNRVKGLAFHPRRPWILASLHSGVVQMWDYRMGTLLDRFDEHDGPVRGVHFH
KTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEHPWIVSASDDQTIRVW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSSSPADDIMR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWVLAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDTVFYVKDRFLRFYEYSTQKEVQVAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDVDGGSYELFIVPKDSAGRADYLQDAKKGSGGSAVF
IARNRFAVLEKSSNQVLVKSLKNEIVKKSPLPIGTDVIYYAGTGNVLCRAEDRVAIFDLQ
QRLVLGELQASAVKYVIWSNDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYSTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIAFLDRDGKNKIITVDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKELDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFDRLAFLYLLTGYLDKVGF
MSKIAGQNNNLMGQFHNALYLGDAKKRVEILENAGQLPLAYVTAATHGLTEIADRLAGEL
GEDVPSLPEGKTRSLLIPPAPLTACGDWPLLRVMRGIFEGGLDATGRAEQEEDYDDAGGD
WGDEDLEIVDASHVIENGDAGHADESETNEEDGDEEGGWDLEDLELPPEADTPKARGPER
SALFVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKALFLDAH
MGSHTFLRAFASAPVIPIAVEKGWSESASPNVRGPPALVFSFAQMDDKLKAAYKATTEGK
FPEALRQFLNILYTIPLLVVDSRREVDEVKELIEIVREYVLGLRMEVKRKELKNDATRQQ
ELAAYFTNCKLQKVHMRLVLTSAMGLCFKGGNYATAANFARMLLDNGPNEAQAKKARQVL
QACGDRKDAHQLNYDFRNPFVVCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICEL
SVVGADASGLLCSPTQSR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaagagcaaccgcgtcaaggggctcgccttccacccgcgc
cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg
ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac
aagacacagccgctcttcgtatccggaggtgacgattacaagatcaaggtgtggaactac
aaaacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcacggtccag
ttccacgacgagcacccgtggatcgtcagtgccagtgatgaccagacaatccgtgtctgg
aactggcagtcacgcacctgcgtggccgtgctgacggggcataatcactatgtcatgtgt
gcttccttccatcccaaggaggacctggtcgtgtcagcgtctctggatcagaccgtccgg
gtgtgggatattggcgcgctcaggaagaagtcgtcgtccccagccgatgacatcatgcgt
ctcactcagatgaacactgatctgtttggaggcattgatgctgtggtcaagtatgtcttg
gagggtcacgaccgtggggtcaactgggcatcgtttcatcccaccctgccacttattgtt
tctggggcagatgaccggcaagtgaaactctggaggatgaatgatacaaaggcatgggag
gttgatactcttagaggtcacatgaacaatgtctcttgtgtattgttccacgcgaagcag
gacatcattgtatccaactcagaagacaagagcatccgtgtttgggatgccacaaagaga
actggtatccagacattcaggcgggagcatgaccgcttctgggtccttgctgctcaccct
gaaatgaatcttcttgcagctggtcatgatagtggcatgattgtgtttaagttggagaga
gagcgcccagctttcgctgttagtggtgatacagtgttctatgtgaaggaccgcttcctc
cgtttctatgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctggg
tcggtcagcttgaatcagtcaccaaggacattatcatatagcccaactgagaatgctgtc
ttgatctgctctgatgtggatgggggctcatatgagcttttcattgttcctaaagattct
gctggcagggctgattatttgcaggatgcaaagaagggatctggtggttctgcagttttc
atagcccggaacaggtttgcagtcctggagaagagcagcaaccaggttttggtgaagagt
cttaagaatgagattgtgaagaaaagccctcttcctattggaactgatgttatttactat
gctggaactggtaacgtattgtgcagagctgaagacagggtggccatctttgatctgcag
cagcggcttgttcttggtgaactccaggcatctgctgttaagtatgtgatctggtcgaat
gatatggagtctgttgcactactcagcaaacatgctgtagtcattgcaaacaagaagctt
gtccatcgctgcacacttcacgaaaccatacgtgtaaagagtggtgcctgggatgaaaat
ggtgtgttcatatattccactctgaaccatatcaagtactgccttcctaatggggacagt
ggcattatcaaaacacttgatgttcctatttacataaccaaggttgtggggaacaccatt
gcctttctggaccgtgatggaaagaacaagattattacagttgatgcttctgaatacatt
ttcaagctggcccttctacggaagcgctatgatcatgttatgagtatgattaagaactca
cagctgtgcgggcaggcagtcatttcttatttgcaacagaaagggtttccagaagttgct
ctccactttgtgaaagatgaaaagaccagatttaacctggctcttgaaagcgggaacatc
caaattgctgttgcttccgcaaaggagctcgatgacaaggatcactggtacaggttggga
attgaggctctgaggcagggaaatgttggtattgttgaatatgcataccagcgtacaaag
aattttgacaggcttgcttttctttatctgctaactggttacttggacaaggtgggtttc
atgtctaagatagctgggcagaataacaatttgatgggccagttccacaatgcattgtat
cttggagatgctaagaaaagagtcgagatcttggagaatgcaggacagctaccactagca
tatgtgactgctgccactcatgggctcactgaaattgccgataggcttgctggtgagtta
ggagaagatgtaccttctctaccggaagggaaaacaagatcacttttaatccctccagca
cctctcacagcttgtggtgattggccattgttgagggtgatgcgtggtatttttgagggt
ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat
tggggtgatgaagacctggaaattgttgatgcaagtcatgtgatagaaaatggagatgct
ggccatgccgatgaaagcgaaacaaatgaagaggatggggacgaggaaggtggctgggac
ctcgaagatctggaattgccgccggaggcagatacaccgaaagctagaggtccggaacgc
tctgctttgttcgtggctcccacaccaggcatgcctgtcagtcaaatctggactcagaag
tcatctcttgctggggagcatgctgcagctgggaactttgacacagcaatgcggctgctt
agccgccagttgggcatcaagaactttgctcctttgaaggccttgtttcttgatgcacat
atgggcagtcatacctttctgcgtgcatttgcaagtgctccagtgatacctattgctgtt
gagaaaggctggagtgaatctgccagtcccaatgtgaggggcccacctgcacttgtgttt
agctttgcgcaaatggacgacaagctgaaggctgcatacaaagccacaaccgagggcaag
ttcccagaggcactgaggcagttcctcaacatcctctacaccatcccgctccttgtcgtg
gactcacggagagaggtcgatgaagtgaaggagcttatcgagatagtgagggagtatgtc
cttggtctcaggatggaagtcaagaggaaggagctgaaaaacgacgccacccggcagcag
gagctggcagcatacttcaccaactgcaagctgcagaaggtccacatgcgcctcgtcctc
accagcgccatgggcctctgcttcaagggcgggaactacgccaccgcagcaaactttgcc
cgcatgctcctggacaatggcccgaacgaggcccaggcgaagaaggcccgtcaggtcctg
caggcctgcggcgataggaaggacgcccaccagctgaactacgacttcagaaacccgttt
gtcgtctgcggggccacctttgtcccaatctaccgcgggcagaaggacgtctcctgcccc
tactgcgcgtcccggttcgtgccctcggtcgagggtcagctgtgcagcatatgcgagctc
tcggtggtcggagcggacgcctcgggcctcctctgctcccctacacaatcaagataa

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