Triticum dicoccoides (wild emmer wheat): 119304309
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Entry
119304309 CDS
T07278
Name
(RefSeq) coatomer subunit alpha-3-like
KO
K05236
coatomer subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119304309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119304309
Membrane trafficking [BR:
tdc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119304309
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119304309
Exosomal proteins of bladder cancer cells
119304309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Fis1_TPR_C
ENTH
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
119304309
NCBI-ProteinID:
XP_037437382
LinkDB
All DBs
Position
5A:complement(703021631..703026790)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLAFHPRRPWILASLHSGVVQMWDYRMGTLLDRFDEHDGPVRGVHFH
KTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEHPWIVSASDDQTIRVW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSSSPADDIMR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWVLAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDTVFYVKDRFLRFYEYSTQKEVQVAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDVDGGSYELFIVPKDSAGRADYLQDAKKGSGGSAVF
IARNRFAVLEKSSNQVLVKSLKNEIVKKSPLPIGTDVIYYAGTGNVLCRAEDRVAIFDLQ
QRLVLGELQASAVKYVIWSNDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYSTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIAFLDRDGKNKIITVDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKELDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFDRLAFLYLLTGYLDKVGF
MSKIAGQNNNLMGQFHNALYLGDAKKRVEILENAGQLPLAYVTAATHGLTEIADRLAGEL
GEDVPSLPEGKTRSLLIPPAPLTACGDWPLLRVMRGIFEGGLDATGRAEQEEDYDDAGGD
WGDEDLEIVDASHVIENGDAGHADESETNEEDGDEEGGWDLEDLELPPEADTPKARGPER
SALFVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKALFLDAH
MGSHTFLRAFASAPVIPIAVEKGWSESASPNVRGPPALVFSFAQMDDKLKAAYKATTEGK
FPEALRQFLNILYTIPLLVVDSRREVDEVKELIEIVREYVLGLRMEVKRKELKNDATRQQ
ELAAYFTNCKLQKVHMRLVLTSAMGLCFKGGNYATAANFARMLLDNGPNEAQAKKARQVL
QACGDRKDAHQLNYDFRNPFVVCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICEL
SVVGADASGLLCSPTQSR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagcaaccgcgtcaaggggctcgccttccacccgcgc
cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg
ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac
aagacacagccgctcttcgtatccggaggtgacgattacaagatcaaggtgtggaactac
aaaacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcacggtccag
ttccacgacgagcacccgtggatcgtcagtgccagtgatgaccagacaatccgtgtctgg
aactggcagtcacgcacctgcgtggccgtgctgacggggcataatcactatgtcatgtgt
gcttccttccatcccaaggaggacctggtcgtgtcagcgtctctggatcagaccgtccgg
gtgtgggatattggcgcgctcaggaagaagtcgtcgtccccagccgatgacatcatgcgt
ctcactcagatgaacactgatctgtttggaggcattgatgctgtggtcaagtatgtcttg
gagggtcacgaccgtggggtcaactgggcatcgtttcatcccaccctgccacttattgtt
tctggggcagatgaccggcaagtgaaactctggaggatgaatgatacaaaggcatgggag
gttgatactcttagaggtcacatgaacaatgtctcttgtgtattgttccacgcgaagcag
gacatcattgtatccaactcagaagacaagagcatccgtgtttgggatgccacaaagaga
actggtatccagacattcaggcgggagcatgaccgcttctgggtccttgctgctcaccct
gaaatgaatcttcttgcagctggtcatgatagtggcatgattgtgtttaagttggagaga
gagcgcccagctttcgctgttagtggtgatacagtgttctatgtgaaggaccgcttcctc
cgtttctatgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctggg
tcggtcagcttgaatcagtcaccaaggacattatcatatagcccaactgagaatgctgtc
ttgatctgctctgatgtggatgggggctcatatgagcttttcattgttcctaaagattct
gctggcagggctgattatttgcaggatgcaaagaagggatctggtggttctgcagttttc
atagcccggaacaggtttgcagtcctggagaagagcagcaaccaggttttggtgaagagt
cttaagaatgagattgtgaagaaaagccctcttcctattggaactgatgttatttactat
gctggaactggtaacgtattgtgcagagctgaagacagggtggccatctttgatctgcag
cagcggcttgttcttggtgaactccaggcatctgctgttaagtatgtgatctggtcgaat
gatatggagtctgttgcactactcagcaaacatgctgtagtcattgcaaacaagaagctt
gtccatcgctgcacacttcacgaaaccatacgtgtaaagagtggtgcctgggatgaaaat
ggtgtgttcatatattccactctgaaccatatcaagtactgccttcctaatggggacagt
ggcattatcaaaacacttgatgttcctatttacataaccaaggttgtggggaacaccatt
gcctttctggaccgtgatggaaagaacaagattattacagttgatgcttctgaatacatt
ttcaagctggcccttctacggaagcgctatgatcatgttatgagtatgattaagaactca
cagctgtgcgggcaggcagtcatttcttatttgcaacagaaagggtttccagaagttgct
ctccactttgtgaaagatgaaaagaccagatttaacctggctcttgaaagcgggaacatc
caaattgctgttgcttccgcaaaggagctcgatgacaaggatcactggtacaggttggga
attgaggctctgaggcagggaaatgttggtattgttgaatatgcataccagcgtacaaag
aattttgacaggcttgcttttctttatctgctaactggttacttggacaaggtgggtttc
atgtctaagatagctgggcagaataacaatttgatgggccagttccacaatgcattgtat
cttggagatgctaagaaaagagtcgagatcttggagaatgcaggacagctaccactagca
tatgtgactgctgccactcatgggctcactgaaattgccgataggcttgctggtgagtta
ggagaagatgtaccttctctaccggaagggaaaacaagatcacttttaatccctccagca
cctctcacagcttgtggtgattggccattgttgagggtgatgcgtggtatttttgagggt
ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat
tggggtgatgaagacctggaaattgttgatgcaagtcatgtgatagaaaatggagatgct
ggccatgccgatgaaagcgaaacaaatgaagaggatggggacgaggaaggtggctgggac
ctcgaagatctggaattgccgccggaggcagatacaccgaaagctagaggtccggaacgc
tctgctttgttcgtggctcccacaccaggcatgcctgtcagtcaaatctggactcagaag
tcatctcttgctggggagcatgctgcagctgggaactttgacacagcaatgcggctgctt
agccgccagttgggcatcaagaactttgctcctttgaaggccttgtttcttgatgcacat
atgggcagtcatacctttctgcgtgcatttgcaagtgctccagtgatacctattgctgtt
gagaaaggctggagtgaatctgccagtcccaatgtgaggggcccacctgcacttgtgttt
agctttgcgcaaatggacgacaagctgaaggctgcatacaaagccacaaccgagggcaag
ttcccagaggcactgaggcagttcctcaacatcctctacaccatcccgctccttgtcgtg
gactcacggagagaggtcgatgaagtgaaggagcttatcgagatagtgagggagtatgtc
cttggtctcaggatggaagtcaagaggaaggagctgaaaaacgacgccacccggcagcag
gagctggcagcatacttcaccaactgcaagctgcagaaggtccacatgcgcctcgtcctc
accagcgccatgggcctctgcttcaagggcgggaactacgccaccgcagcaaactttgcc
cgcatgctcctggacaatggcccgaacgaggcccaggcgaagaaggcccgtcaggtcctg
caggcctgcggcgataggaaggacgcccaccagctgaactacgacttcagaaacccgttt
gtcgtctgcggggccacctttgtcccaatctaccgcgggcagaaggacgtctcctgcccc
tactgcgcgtcccggttcgtgccctcggtcgagggtcagctgtgcagcatatgcgagctc
tcggtggtcggagcggacgcctcgggcctcctctgctcccctacacaatcaagataa
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integrated database retrieval system